RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 IRF8Q02556 426 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 STX4Q12846 297 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 DOC2AQ14183 400 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 TERF2Q15554 542 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 OR4D1Q15615 310 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 PAGE2BQ5JRK9 111 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 ARSKQ6UWY0 536 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 CXXC5Q7LFL8 322 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 CCDC25Q86WR0 208 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 ZNF227Q86WZ6 799 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 TMEM132CQ8N3T6 1108 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 LRRN4CLQ8ND94 238 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 OR10Q1Q8NGQ4 319 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 ASB15Q8WXK1 588 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 F2RL3Q96RI0 385 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 CSF3RQ99062 836 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 EFCAB11Q9BUY7 163 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 PITHD1Q9GZP4 211 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 NT5DC2Q9H857 520 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 TRIM45Q9H8W5 580 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 TIMMDC1Q9NPL8 285 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 HPF1Q9NWY4 346 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 KCMF1Q9P0J7 381 aa14.87□□□□□ -0.03
PDLIM7-213ENST00000505074 TCRBV9S1A1TA0A576 114 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 SUPT3HB4E1H0 165 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 TGFBR3LH3BV60 316 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 EIF3HO15372 352 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 SH3BGRLO75368 114 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 SUPT3HO75486 399 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 PCNAP12004 261 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 TNNI3P19429 210 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 MSH2P43246 934 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 LIM2P55344 173 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 DLX5P56178 289 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 RAB10P61026 200 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 PLGLB1Q02325 96 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 C2orf54Q08AI8 447 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 LAPTM5Q13571 262 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 ELAVL1Q15717 326 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 CMPK2Q5EBM0 449 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 ABHD17CQ6PCB6 329 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 C16orf47Q6ZP98 133 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 C3orf62Q6ZUJ4 267 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 MAATS1Q7Z4T9 603 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 MDGA2Q7Z553 956 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 VN1R5Q7Z5H4 357 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 CDC20BQ86Y33 519 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 PPM1NQ8N819 430 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 C16orf52Q8NHV5 167 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 QRFPRQ96P65 431 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 GPR22Q99680 433 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 ERP44Q9BS26 406 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 EHD1Q9H4M9 534 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 ALG9Q9H6U8 611 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 WHRNQ9P202 907 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 ZNF223Q9UK11 482 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 PYCARDQ9ULZ3 195 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 DAPP1Q9UN19 280 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 YARS2Q9Y2Z4 477 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 SPACA6W5XKT8 324 aa14.86□□□□□ -0.03
PDLIM7-213ENST00000505074 DNAJC13O75165 2243 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 JMJD1CQ15652 2540 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 SYNDIG1LA6NDD5 238 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 WWP2O00308 870 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 RAD51CO43502 376 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 PRKNO60260 465 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 OR2J2O76002 312 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 PDE9AO76083 593 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 RAF1P04049 648 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 TUBB4AP04350 444 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 SPRP35270 261 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 GGT5P36269 586 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 ZFP36L2P47974 494 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 KCNC1P48547 511 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 CHIT1Q13231 466 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 EFTUD2Q15029 972 aaKnown RBP eCLIP14.85□□□□□ -0.037e-13■■■□□ 19.1
PDLIM7-213ENST00000505074 DEFB113Q30KQ7 82 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 EMC4Q5J8M3 183 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 CDKL4Q5MAI5 379 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 PAOXQ6QHF9 649 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 PAMR1Q6UXH9 720 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 IL20RBQ6UXL0 311 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 HSDL2Q6YN16 418 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 DAZLQ92904 295 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 KCNC2Q96PR1 638 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 MCMBPQ9BTE3 642 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 OR8D2Q9GZM6 311 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 PLSCR2Q9NRY7 297 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 ZNF490Q9ULM2 529 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 ZNF407Q9C0G0 2248 aa14.85□□□□□ -0.03
PDLIM7-213ENST00000505074 CSPG4Q6UVK1 2322 aa14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 FAM159BA6NKW6 160 aa14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 ACOT7O00154 380 aa14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 PRAMEF4O60810 478 aa14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 LDB3O75112 727 aa14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 WISP3O95389 354 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-213ENST00000505074 CD22P20273 847 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms