RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 REPS1Q96D71 796 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 CCDC120Q96HB5 630 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 MAGED4Q96JG8 741 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 TSPAN10Q9H1Z9 355 aaPredicted RBP17.76■□□□□ 0.43
CLIP2-206ENST00000487091 IPPKQ9H8X2 491 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 CPSF2Q9P2I0 782 aaKnown RBP17.76■□□□□ 0.43
CLIP2-206ENST00000487091 MYOTQ9UBF9 498 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 IKBKGQ9Y6K9 419 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 CELSR2Q9HCU4 2923 aa17.76■□□□□ 0.43
CLIP2-206ENST00000487091 LRRC14BA6NHZ5 514 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 SAP18O00422 153 aaKnown RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 PRKNO60260 465 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 COL6A2P12110 1019 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 ZNF24P17028 368 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 TNNI3P19429 210 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 CNTFP26441 200 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 RAP1GDS1P52306 607 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 IGLV3-21P80748 117 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 ART3Q13508 389 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 RNFT1Q5M7Z0 435 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 RPTNQ6XPR3 784 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 GOLGA7Q7Z5G4 137 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 ZCCHC7Q8N3Z6 543 aaKnown RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 ZNF808Q8N4W9 903 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 MTERF1Q99551 399 aaKnown RBP17.75■□□□□ 0.43
CLIP2-206ENST00000487091 PHF11Q9UIL8 331 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 TMCO1Q9UM00 188 aa17.75■□□□□ 0.43
CLIP2-206ENST00000487091 MYOCOSA0A1B0GUC4 107 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 C17orf105B2RV13 164 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 FOXE1O00358 373 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 PLPP1O14494 284 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 PEX1O43933 1283 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 SIX3O95343 332 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 ECHS1P30084 290 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 TLX1P31314 330 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 MEOX1P50221 254 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 RPS13P62277 151 aaKnown RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 CUL3Q13618 768 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 C3AR1Q16581 482 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 CPSF6Q16630 551 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 BNC2Q6ZN30 1099 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 GPR180Q86V85 440 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 SULF2Q8IWU5 870 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 RNF175Q8N4F7 328 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 C16orf52Q8NHV5 167 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 TANKQ92844 425 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 SORBS1Q9BX66 1292 aaKnown RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 OR8D2Q9GZM6 311 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 TIMMDC1Q9NPL8 285 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 ZNF180Q9UJW8 692 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 PPT2Q9UMR5 302 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 ENTPD4Q9Y227 616 aa17.74■□□□□ 0.43
CLIP2-206ENST00000487091 KLF2Q9Y5W3 355 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-206ENST00000487091 A8MVJ9 347 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 STX16-NPEPL1H3BU86 382 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-206ENST00000487091 STX16O14662 325 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 OR2J2O76002 312 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 KRT38O76015 456 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 COX7A2P14406 83 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 STT3AP46977 705 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 TSNAXIP1Q2TAA8 658 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 XKRXQ6PP77 449 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 MDGA2Q7Z553 956 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 MRGPRGQ86SM5 289 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 PTGR2Q8N8N7 351 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-206ENST00000487091 ZFP62Q8NB50 900 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-206ENST00000487091 OR5L2Q8NGL0 311 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 WDR20Q8TBZ3 569 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 SLC2A12Q8TD20 617 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 ASB15Q8WXK1 588 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 DDX31Q9H8H2 851 aaKnown RBP17.73■□□□□ 0.43
CLIP2-206ENST00000487091 LIN28AQ9H9Z2 209 aaKnown RBP17.73■□□□□ 0.43
CLIP2-206ENST00000487091 ZNF358Q9NW07 568 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 HPF1Q9NWY4 346 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 SH3BGRL2Q9UJC5 107 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 TINAGQ9UJW2 476 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 ERVK-11Q9UQG0 969 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 RNF11Q9Y3C5 154 aa17.73■□□□□ 0.43
CLIP2-206ENST00000487091 NCOA6Q14686 2063 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 A0A087WUV0 522 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 FGF17O60258 216 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 CLDN9O95484 217 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 ETHE1O95571 254 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 ESRRAP11474 423 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 HK2P52789 917 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 RNF4P78317 190 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 TNFRSF17Q02223 184 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 ID2Q02363 134 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 SP5Q6BEB4 398 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 MRM1Q6IN84 353 aaKnown RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 C16orf47Q6ZP98 133 aaPredicted RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 CHERPQ8IWX8 916 aaKnown RBP17.72■□□□□ 0.43
CLIP2-206ENST00000487091 ZNF321PQ8N8H1 164 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 DCAKDQ8WVC6 231 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 PHF21BQ96EK2 531 aa17.72■□□□□ 0.43
CLIP2-206ENST00000487091 DGAT2Q96PD7 388 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms