RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TANKQ92844 425 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 MIEF2Q96C03 454 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 MTERF3Q96E29 417 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 TEX37Q96LM6 180 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 WDR54Q9H977 334 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 MRGBPQ9NV56 204 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 C14orf105Q9NVL8 296 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 ATP6V1HQ9UI12 483 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 CES1P1Q9UKY3 287 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 DCHS1Q96JQ0 3298 aa16.55■□□□□ 0.24
CHMP3-207ENST00000485465 WASHC1A8K0Z3 465 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 GABRR3A8MPY1 467 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CLDN4O14493 209 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 SCAMP2O15127 329 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 TBX19O60806 448 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CNOT3O75175 753 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CDC123O75794 336 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CD63P08962 238 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 RAB40ALP0C0E4 278 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 TCN2P20062 427 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 IL12AP29459 219 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 RPL3P39023 403 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 STAT5AP42229 794 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CLNS1AP54105 237 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 ACTN3Q08043 901 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 PDE7AQ13946 482 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 UBAP2LQ14157 1087 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 NCF4Q15080 339 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 UGT8Q16880 541 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 TBC1D25Q3MII6 688 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 SLC48A1Q6P1K1 146 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 R3HCC1LQ7Z5L2 792 aaKnown RBP16.54■□□□□ 0.24
CHMP3-207ENST00000485465 DTX1Q86Y01 620 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 TICAM1Q8IUC6 712 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 NUDT8Q8WV74 236 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 STARD8Q92502 1023 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 NKD1Q969G9 470 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 ZBTB18Q99592 522 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 MIEF1Q9NQG6 463 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 PRTFDC1Q9NRG1 225 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 EHD3Q9NZN3 535 aa16.54■□□□□ 0.24
CHMP3-207ENST00000485465 CTNSO60931 367 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 DCTN3O75935 186 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 COX7A2P14406 83 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 HSD17B7P56937 341 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 BTG2P78543 158 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 PRSS53Q2L4Q9 553 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 MFSD4BQ5TF39 518 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 ANKRD26P1Q6NSI1 321 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 LAPTM4BQ86VI4 370 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 PRSS58Q8IYP2 241 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 GLB1L3Q8NCI6 653 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-207ENST00000485465 OR7A2PQ8NGA2 310 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 OR9I1Q8NGQ6 314 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 TESCQ96BS2 214 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 PPCDCQ96CD2 204 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 ZNF764Q96H86 408 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-207ENST00000485465 SPSB2Q99619 263 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 PRPF18Q99633 342 aaKnown RBP16.53■□□□□ 0.24
CHMP3-207ENST00000485465 SOX17Q9H6I2 414 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-207ENST00000485465 TMEM45AQ9NWC5 275 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 TAS2R7Q9NYW3 318 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 C5AR2Q9P296 337 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 NXT1Q9UKK6 140 aaKnown RBP16.53■□□□□ 0.24
CHMP3-207ENST00000485465 UTS2RQ9UKP6 389 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 PSME2Q9UL46 239 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 MMACHCQ9Y4U1 282 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 SDK2Q58EX2 2172 aa16.53■□□□□ 0.24
CHMP3-207ENST00000485465 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 FAM234BA2RU67 622 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 OR2W5A6NFC9 320 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 C9JVG2 144 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 FGF17O60258 216 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 LIPCP11150 499 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 DDX5P17844 614 aaKnown RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 PPP2R1BP30154 601 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 ADSLP30566 484 aaPredicted RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 ZFP36L2P47974 494 aaKnown RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 FOXL2P58012 376 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 RHAGQ02094 409 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 KLF10Q13118 480 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 SLC13A2Q13183 592 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 PGS1Q32NB8 556 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 MINDY4Q4G0A6 757 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 AGKQ53H12 422 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 CPTPQ5TA50 214 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 QSOX2Q6ZRP7 698 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 SHISA6Q6ZSJ9 500 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 CAMKMTQ7Z624 323 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 FUNDC1Q8IVP5 155 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 SCUBE1Q8IWY4 988 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 ENDOVQ8N8Q3 282 aaKnown RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 OR4K14Q8NGD5 310 aa16.52■□□□□ 0.24
CHMP3-207ENST00000485465 EXOSC8Q96B26 276 aaKnown RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 ANKRD9Q96BM1 317 aaPredicted RBP16.52■□□□□ 0.24
CHMP3-207ENST00000485465 COQ8BQ96D53 544 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms