RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CATSPERZQ9NTU4 200 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CNIH4Q9P003 139 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 VTI1BQ9UEU0 232 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 ANAPC5Q9UJX4 755 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 CLCA3PQ9Y6N3 262 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 DSCAMO60469 2012 aa6.67□□□□□ -1.34
SPTLC1-205ENST00000477888 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 A0A1W2PNV4 684 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CTAGE15A4D2H0 777 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 C16orf97H3BN30 126 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 PSTPIP1O43586 416 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 OR1F1O43749 312 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SPOPO43791 374 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 NDUFS3O75489 264 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 THBDP07204 575 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SOD3P08294 240 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 DANCRP0C864 163 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CDH1P12830 882 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CYP4B1P13584 511 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CPN1P15169 458 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 NPPBP16860 134 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 FMO4P31512 558 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 GRK3P35626 688 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 MMP16P51512 607 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 HNRNPFP52597 415 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 NAGLUP54802 743 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CASP9P55211 416 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 EIF3EP60228 445 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 TBPL1P62380 186 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ZBED6P86452 979 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 VLDLRP98155 873 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ASPHQ12797 758 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CDH17Q12864 832 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 RUNX2Q13950 521 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 RCAN2Q14206 197 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 NR1I3Q14994 352 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC18A3Q16572 532 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ASTE1Q2TB18 679 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM174BQ3ZCQ3 159 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 FNDC7Q5VTL7 733 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 DARS2Q6PI48 645 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 RBM43Q6ZSC3 357 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 LINC00523Q86TU6 105 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CTAGE6Q86UF2 777 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SPNS2Q8IVW8 549 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 GCNT2Q8N0V5 402 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 MPP5Q8N3R9 675 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 TC2NQ8N9U0 490 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 OR10G3Q8NGC4 313 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 LPGAT1Q92604 370 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 DAZLQ92904 295 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SPACA9Q96E40 222 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ZC3HAV1LQ96H79 300 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 LCORQ96JN0 433 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 GNRHR2Q96P88 292 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 TNFRSF13CQ96RJ3 184 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM118BQ9BPY3 351 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 DOHHQ9BU89 302 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SGPP1Q9BX95 441 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 OR8D2Q9GZM6 311 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 KLHL31Q9H511 634 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CCDC177Q9NQR7 707 aaPredicted RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 PRTFDC1Q9NRG1 225 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ELOVL5Q9NYP7 299 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 FETUBQ9UGM5 382 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 ZFP69BQ9UJL9 534 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 CNOT11Q9UKZ1 510 aaKnown RBP6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 PCDHA13Q9Y5I0 950 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 SCN3AQ9NY46 2000 aa6.66□□□□□ -1.34
SPTLC1-205ENST00000477888 HEATR5BQ9P2D3 2071 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 IGHV4-30-2A0A087WSY4 118 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 TRBC2A0A5B9 178 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 C4orf51C9J302 202 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 EIF3FO00303 357 aaPredicted RBP6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 PSMD3O43242 534 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ZBTB14O43829 449 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 OR10H2O60403 315 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 NDUFS7O75251 213 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ETHE1O95571 254 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ESR1P03372 595 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SERPIND1P05546 499 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 HNF4AP41235 474 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 GRIA1P42261 906 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SCTRP47872 440 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC6A12P48065 614 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 MARCKSL1P49006 195 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CLCN7P51798 805 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 RGS1Q08116 209 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC13A2Q13183 592 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 TCEAL1Q15170 157 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 PHKG1Q16816 387 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 EIPR1Q53HC9 387 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 BEX5Q5H9J7 111 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 HIST2H2BDQ6DRA6 164 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms