RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 MLC1Q15049 377 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 TCTE1Q5JU00 501 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 C18orf63Q68DL7 685 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 OR52E8Q6IFG1 317 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 NIPAL1Q6NVV3 410 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 SLC48A1Q6P1K1 146 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 ERICH5Q6P6B1 374 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 SERPINA11Q86U17 422 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 KMT5CQ86Y97 462 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GOLM1Q8NBJ4 401 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 OR2I1PQ8NGU4 316 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 KLHL6Q8WZ60 621 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 UCN3Q969E3 161 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 BBS4Q96RK4 519 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GTPBP2Q9BX10 602 aaKnown RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 NPLQ9BXD5 320 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 ANKHQ9HCJ1 492 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 SLAMF7Q9NQ25 335 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 STARD5Q9NSY2 213 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 IRAK4Q9NWZ3 460 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 RAB23Q9ULC3 237 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 ERVK-11Q9UQG0 969 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 NAALAD2Q9Y3Q0 740 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 NUP210LQ5VU65 1888 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 COL5A1P20908 1838 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF860A6NHJ4 632 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 GLOD5A6NK44 160 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 H3BNX3 289 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
TRAF4-210ENST00000475329 KRT75O95678 551 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 BAG2O95816 211 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 SOX11P35716 441 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 SESN3P58005 492 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 HSD11B2P80365 405 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 CFHR1Q03591 330 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 SLC34A1Q06495 639 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 HSPB3Q12988 150 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 RUNX2Q13950 521 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 SPIDRQ14159 915 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 MTX3Q5HYI7 312 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 PERM1Q5SV97 790 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 GARNL3Q5VVW2 1013 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 FAM180BQ6P0A1 224 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 ZC3H14Q6PJT7 736 aaKnown RBP12.98□□□□□ -0.33
TRAF4-210ENST00000475329 ANGPTL8Q6UXH0 198 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 USP53Q70EK8 1073 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 PRSS41Q7RTY9 318 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 SPPL2CQ8IUH8 684 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 ARHGEF39Q8N4T4 335 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 PNPT1Q8TCS8 783 aaKnown RBP12.98□□□□□ -0.33
TRAF4-210ENST00000475329 DUS3LQ96G46 650 aaKnown RBP12.98□□□□□ -0.33
TRAF4-210ENST00000475329 NSMCE2Q96MF7 247 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 KCMF1Q9P0J7 381 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 PSME2Q9UL46 239 aa12.98□□□□□ -0.33
TRAF4-210ENST00000475329 RNF103-CHMP3A0A140T963 221 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 FAM86C2PA6NEL3 165 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 MYO1GB0I1T2 1018 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CXCR6O00574 342 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 PGRMC2O15173 223 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 GPIP06744 558 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CTSBP07858 339 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF883P0CG24 379 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CSNK2A2P19784 350 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SEPHS1P49903 392 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 DUSP3P51452 185 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 NUBP1P53384 320 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 OLR1P78380 273 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 DAB2P98082 770 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 FADDQ13158 208 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SQSTM1Q13501 440 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 RGNQ15493 299 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 INAVAQ3KP66 663 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SNAP47Q5SQN1 464 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 TMTC4Q5T4D3 741 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 IRAK1BP1Q5VVH5 260 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CPZQ66K79 652 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SAMD14Q8IZD0 417 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CLEC4FQ8N1N0 589 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CA13Q8N1Q1 262 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 C10orf111Q8N326 155 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-210ENST00000475329 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms