RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PALM2Q8IXS6 379 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CIARTQ8N365 385 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM132CQ8N3T6 1108 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXW8Q8N3Y1 598 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF321PQ8N8H1 164 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 RNF214Q8ND24 703 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SIMC1Q8NDZ2 872 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TRPV3Q8NET8 790 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TNIP2Q8NFZ5 429 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC5A11Q8WWX8 675 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SREK1Q8WXA9 508 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF669Q96BR6 464 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TSNARE1Q96NA8 513 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 NDNQ99608 321 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TSGA10Q9BZW7 698 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SH2D2AQ9NP31 389 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SEMA4BQ9NPR2 832 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 PRTFDC1Q9NRG1 225 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SACM1LQ9NTJ5 587 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 BEX4Q9NWD9 120 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ARL15Q9NXU5 204 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ALKBH4Q9NXW9 302 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF629Q9UEG4 869 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 MTRF1LQ9UGC7 380 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 FOXD3Q9UJU5 478 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 PCDHGB3Q9Y5G1 929 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ARHGAP21Q5T5U3 1957 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 EML6Q6ZMW3 1958 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ROS1P08922 2347 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 A0A0G2JN53 185 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SYNDIG1LA6NDD5 238 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 H7C1Q1 480 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CYR61O00622 381 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CLDN4O14493 209 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ERI3O43414 337 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 IFNA2P01563 188 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 P04436 131 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 RFPL3SP0C7P2 107 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 HNRNPH1P31943 449 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 TIMP3P35625 211 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PIGAP37287 484 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 MAGEA3P43357 314 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 KCNJ1P48048 391 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SERPINB4P48594 390 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF136P52737 540 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CDKN2DP55273 166 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 AP1S2P56377 157 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 WNT3P56703 355 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 RAB38P57729 211 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 RNF4P78317 190 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 BTN3A2P78410 334 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 BMPR2Q13873 1038 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 RUNX2Q13950 521 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CSHL1Q14406 222 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF791Q3KP31 576 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 TOR1AIP1Q5JTV8 583 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 Q5PR19 223 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 RBM20Q5T481 1227 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ANKRD22Q5VYY1 191 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 UGT3A1Q6NUS8 523 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PAQR3Q6TCH7 311 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 OPN5Q6U736 354 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 NXPE4Q6UWF7 544 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 GSTA5Q7RTV2 222 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 MAATS1Q7Z4T9 603 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 TMPRSS11BQ86T26 416 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 KIF18BQ86Y91 864 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LACC1Q8IV20 430 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ANKMY2Q8IV38 441 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LMNTD2Q8IXW0 634 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF595Q8IYB9 648 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 MYO1HQ8N1T3 1032 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 AGGF1Q8N302 714 aaeCLIP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LRRC25Q8N386 305 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM47BQ8NA70 645 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 MORN4Q8NDC4 146 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 OR8K3Q8NH51 312 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 OR14A16Q8NHC5 309 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 NEIL3Q8TAT5 605 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LINC01560Q8TB33 94 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC2A12Q8TD20 617 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CALML6Q8TD86 181 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PAQR8Q8TEZ7 354 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 PTPMT1Q8WUK0 201 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM158Q8WZ71 300 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 DAZLQ92904 295 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 GAL3ST3Q96A11 431 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXL8Q96CD0 374 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LINGO1Q96FE5 620 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 LRRC46Q96FV0 321 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CAPZA3Q96KX2 299 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 QRFPRQ96P65 431 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 CSF3RQ99062 836 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 AIF1LQ9BQI0 150 aa4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 NPLQ9BXD5 320 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-204ENST00000474025 OR8D2Q9GZM6 311 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms