RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PSMD12O00232 456 aaPredicted RBP8.59□□□□□ -1.03
VCL-204ENST00000472585 DVL2O14641 736 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 SUSD5O60279 629 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 SMPD2O60906 423 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 ETHE1O95571 254 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 EPXP11678 715 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 GDF5P43026 501 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 ASCL1P50553 236 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 LIM2P55344 173 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 HSD17B7P56937 341 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 RAB38P57729 211 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 RNF4P78317 190 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 CCZ1BP86790 482 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 CCZ1P86791 482 aaPredicted RBP8.59□□□□□ -1.03
VCL-204ENST00000472585 SLC10A1Q14973 349 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 HSPB2Q16082 182 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 RIPPLY2Q5TAB7 128 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 NDUFAF5Q5TEU4 345 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 NIPAL1Q6NVV3 410 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 DGAT2L6Q6ZPD8 337 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 SLCO4C1Q6ZQN7 724 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 CAPN12Q6ZSI9 719 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 UBE3DQ7Z6J8 389 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 KIF18BQ86Y91 864 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 GPALPP1Q8IXQ4 340 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.59□□□□□ -1.03
VCL-204ENST00000472585 MYO1HQ8N1T3 1032 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 FAM109AQ8N4B1 249 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 TRPV3Q8NET8 790 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 RNASE6Q93091 150 aaKnown RBP8.59□□□□□ -1.03
VCL-204ENST00000472585 KIAA1191Q96A73 305 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 Q96MF0 132 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 FAM173AQ9BQD7 235 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 LDAHQ9H6V9 325 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 EXO5Q9H790 373 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 PELI2Q9HAT8 420 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 TAS2R13Q9NYV9 303 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 SAMD15Q9P1V8 674 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 VTI1BQ9UEU0 232 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 MTRF1LQ9UGC7 380 aaKnown RBP8.59□□□□□ -1.03
VCL-204ENST00000472585 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 MAD1L1Q9Y6D9 718 aa8.59□□□□□ -1.03
VCL-204ENST00000472585 LRRC3CA6NJW4 275 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CLCA1A8K7I4 914 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HRKO00198 91 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CDC7O00311 574 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CTNSO60931 367 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 LDB3O75112 727 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 GOSR1O95249 250 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HIST1H2AGP0C0S8 130 aaPredicted RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 CCDC175P0C221 793 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 GABRA1P14867 456 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 BMP7P18075 431 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HIST1H2ADP20671 130 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 BMP5P22003 454 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CERS1P27544 350 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CEACAM8P31997 349 aaPredicted RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 MAN2A2P49641 1150 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 RGS4P49798 205 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 PLA2G16P53816 162 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 AP1S2P56377 157 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 IL2P60568 153 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 SARNPP82979 210 aaKnown RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 SLC13A2Q13183 592 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CBLBQ13191 982 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 BMPR2Q13873 1038 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CRYMQ14894 314 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ELAVL1Q15717 326 aaKnown RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 ADPRMQ3LIE5 342 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 PIGGQ5H8A4 983 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HSDL2Q6YN16 418 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 RTL4Q6ZR62 310 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 FAM47EQ6ZV65 393 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 TMPRSS11BQ86T26 416 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 CNTN4Q8IWV2 1026 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 PHC2Q8IXK0 858 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 LMNTD2Q8IXW0 634 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 KLHDC8AQ8IYD2 350 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ULK2Q8IYT8 1036 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 LINC01560Q8TB33 94 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 DOK4Q8TEW6 326 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ZNF721Q8TF20 911 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ANKRD9Q96BM1 317 aaPredicted RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 SARAFQ96BY9 339 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HIST1H2AHQ96KK5 128 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 HIST1H2AJQ99878 128 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 H2AFJQ9BTM1 129 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ALOXE3Q9BYJ1 711 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 SLC6A15Q9H2J7 730 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 XAB2Q9HCS7 855 aaKnown RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 ADAP2Q9NPF8 381 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 PRDM7Q9NQW5 492 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
VCL-204ENST00000472585 ZNF490Q9ULM2 529 aaPredicted RBP8.58□□□□□ -1.04
VCL-204ENST00000472585 TRGV5A0A0B4J1U4 118 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 WASHC1A8K0Z3 465 aa8.57□□□□□ -1.04
VCL-204ENST00000472585 J3QL48 77 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms