RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 AMER3Q8N944 861 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MGARPQ8TDB4 240 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SREK1Q8WXA9 508 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 GAL3ST3Q96A11 431 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 TP53INP1Q96A56 240 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PNPLA2Q96AD5 504 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 FKBP10Q96AY3 582 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SNRNP40Q96DI7 357 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 MTFMTQ96DP5 389 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 MS4A6EQ96DS6 147 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MAGEB10Q96LZ2 347 aaPredicted RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 FER1L6-AS2Q96M78 137 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 FRG2BQ96QU4 278 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 F2RL3Q96RI0 385 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SHCBP1LQ9BZQ2 653 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 REXO4Q9GZR2 422 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 SLC26A1Q9H2B4 701 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ACBD3Q9H3P7 528 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SLAMF7Q9NQ25 335 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ASF1BQ9NVP2 202 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 HCN3Q9P1Z3 774 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 FBXL4Q9UKA2 621 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 VPS4AQ9UN37 437 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 CDC14AQ9UNH5 594 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 NTNG1Q9Y2I2 539 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 NAALAD2Q9Y3Q0 740 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 TSC22D4Q9Y3Q8 395 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SLC22A7Q9Y694 548 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ICE1Q9Y2F5 2266 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 LRIT2A6NDA9 550 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 HMGB1P1B2RPK0 211 aaPredicted RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 H0YIG0 161 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SAP18O00422 153 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 RTCAO00442 366 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 BIRC5O15392 142 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 NPHS1O60500 1241 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 GALR3O60755 368 aaPredicted RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 ETHE1O95571 254 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 TGFB1P01137 390 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PDYNP01213 254 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 ENO1P06733 434 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 SMIM10L1P0DMW3 83 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PIM1P11309 404 aaPredicted RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 ITGA3P26006 1051 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PIK3CBP42338 1070 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 HTR6P50406 440 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PLA2G16P53816 162 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 FOXA1P55317 472 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SOX8P57073 446 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SKP1P63208 163 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 OLR1P78380 273 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 RCN2Q14257 317 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 CHI3L2Q15782 390 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 EIF2S3LQ2VIR3 472 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 ADPRMQ3LIE5 342 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SGO1Q5FBB7 561 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 VWA2Q5GFL6 755 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 CRB2Q5IJ48 1285 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 HHATQ5VTY9 493 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 KHDRBS2Q5VWX1 349 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 ABHD17CQ6PCB6 329 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 CUZD1Q86UP6 607 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 CISD2Q8N5K1 135 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 CLEC1AQ8NC01 280 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 OR2L5Q8NG80 312 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 OR11G2Q8NGC1 345 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PPP1R14CQ8TAE6 165 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 METTL6Q8TCB7 284 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 STT3BQ8TCJ2 826 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SELENOMQ8WWX9 145 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 C8orf44Q96CB5 159 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 CMTM7Q96FZ5 175 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SMIM10Q96HG1 83 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 FAR2Q96K12 515 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 CNDP1Q96KN2 507 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 IP6K3Q96PC2 410 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 HBEGFQ99075 208 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 PAIP2Q9BPZ3 127 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 YIPF2Q9BWQ6 316 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 OR51B5Q9H339 312 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 ELOVL6Q9H5J4 265 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 WDR54Q9H977 334 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 TNFRSF12AQ9NP84 129 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
SMC4-213ENST00000472282 NKIRAS1Q9NYS0 192 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 C5AR2Q9P296 337 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 TRPC4Q9UBN4 977 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 ADGRE2Q9UHX3 823 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 SNX6Q9UNH7 406 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 FIS1Q9Y3D6 152 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
SMC4-213ENST00000472282 ZGRF1Q86YA3 2104 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms