RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SSTP61278 116 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 HERV-K104P63124 156 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 CYCSP99999 105 aaKnown RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 DHODHQ02127 395 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 MTF1Q14872 753 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 MTHFSDQ2M296 383 aaKnown RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 TMEM30BQ3MIR4 351 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 CES4AQ5XG92 561 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 CAPN13Q6MZZ7 669 aaPredicted RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 ARHGAP11AQ6P4F7 1023 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 C1orf186Q6ZWK4 172 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 USP43Q70EL4 1123 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 Q71RC1 249 aaPredicted RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 TAF8Q7Z7C8 310 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 C17orf64Q86WR6 236 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 CACUL1Q86Y37 369 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 KDM8Q8N371 416 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 CCDC197Q8NCU1 140 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 ANKRD20A12PQ8NF67 263 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 C8orf46Q8TAG6 207 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 GPR148Q8TDV2 347 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 DNASE2BQ8WZ79 361 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 GPR137Q96N19 417 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 FAM111AQ96PZ2 611 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 LITAFQ99732 161 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 SPAG8Q99932 426 aaPredicted RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 AGPAT1Q99943 283 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 SYT15Q9BQS2 421 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 ZNF577Q9BSK1 485 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 KRT23Q9C075 422 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 HSD3B7Q9H2F3 369 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 DPEP3Q9H4B8 488 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 ZNF696Q9H7X3 374 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 MED20Q9H944 212 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 UBE2TQ9NPD8 197 aaPredicted RBP3.49□□□□□ -1.85
PRPF3-204ENST00000470824 HOMER3Q9NSC5 361 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 MED17Q9NVC6 651 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 NDUFA13Q9P0J0 144 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 SPASTQ9UBP0 616 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 FAM153AQ9UHL3 310 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 GAB2Q9UQC2 676 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 ZHX2Q9Y6X8 837 aa3.49□□□□□ -1.85
PRPF3-204ENST00000470824 PRR23AA6NEV1 266 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 SRRM4A7MD48 611 aaKnown RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 NPIPB9F8W1W9 429 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 B4GAT1O43505 415 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 SSX5O60225 188 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 CLDN1O95832 211 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ANGPTL1O95841 491 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 LYNP07948 512 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 TPBGLP0DKB5 382 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ZNF26P17031 533 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 PRKACGP22612 351 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 FCARP24071 287 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MMP12P39900 470 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ALDH3B1P43353 468 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 SLC6A12P48065 614 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 PITPNBP48739 271 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 GEMP55040 296 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 BACE1P56817 501 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 EVCP57679 992 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MFGE8Q08431 387 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MSLNQ13421 630 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 DRP2Q13474 957 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MEF2DQ14814 521 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 OR1C1Q15619 314 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 TRADDQ15628 312 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 CARTPTQ16568 116 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 RFTN2Q52LD8 501 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MPPE1Q53F39 396 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 HERC4Q5GLZ8 1057 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 NKAIN2Q5VXU1 208 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 OR6B2Q6IFH4 312 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 WDR88Q6ZMY6 472 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 RBM43Q6ZSC3 357 aaKnown RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 BHLHA9Q7RTU4 235 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ELMOD2Q8IZ81 293 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 CNNM3Q8NE01 707 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 OR6M1Q8NGM8 313 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 OR5M9Q8NGP3 310 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 OR4L1Q8NH43 312 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 HCAR2Q8TDS4 363 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 RPGRIP1Q96KN7 1286 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 CXorf58Q96LI9 332 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ZNF300Q96RE9 604 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 USP28Q96RU2 1077 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 B3GAT2Q9NPZ5 323 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 FAM212BQ9NTI7 297 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 VPS54Q9P1Q0 977 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 KLK11Q9UBX7 282 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 NARFQ9UHQ1 456 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MRTO4Q9UKD2 239 aaKnown RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ISY1Q9ULR0 285 aaKnown RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 MTF2Q9Y483 593 aaPredicted RBP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.48□□□□□ -1.85
PRPF3-204ENST00000470824 KIAA1217Q5T5P2 1943 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 ABCA6Q8N139 1617 aa3.48□□□□□ -1.85
PRPF3-204ENST00000470824 DENND4BO75064 1496 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms