RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-209ENST00000469852 CRB3Q9BUF7 120 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 GPR87Q9BY21 358 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 KCNK13Q9HB14 408 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 NECTIN3Q9NQS3 549 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 C5AR2Q9P296 337 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 PHF11Q9UIL8 331 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 C3orf18Q9UK00 162 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
COL9A3-209ENST00000469852 EXO1Q9UQ84 846 aaKnown RBP13.91□□□□□ -0.18
COL9A3-209ENST00000469852 PGRMC2O15173 223 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 LDB3O75112 727 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 CREG1O75629 220 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 HEXBP07686 556 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 NR2F6P10588 404 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 LSP1P33241 339 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 SEC24CP53992 1094 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 DIO3P55073 304 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 ID2Q02363 134 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 TLE3Q04726 772 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 ZNF763Q0D2J5 394 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 PRSS53Q2L4Q9 553 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 LSM12Q3MHD2 195 aaKnown RBP13.9□□□□□ -0.18
COL9A3-209ENST00000469852 TMEM198Q66K66 360 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 MED25Q71SY5 747 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 SCUBE1Q8IWY4 988 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 OR4N5Q8IXE1 308 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 LIX1Q8N485 282 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 ADAMTS17Q8TE56 1095 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 METTL2AQ96IZ6 378 aaKnown RBP13.9□□□□□ -0.18
COL9A3-209ENST00000469852 MARK4Q96L34 752 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 TSSK3Q96PN8 268 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 CCNL2Q96S94 520 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-209ENST00000469852 PFDN4Q9NQP4 134 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 NXT1Q9UKK6 140 aaKnown RBP13.9□□□□□ -0.18
COL9A3-209ENST00000469852 TMED5Q9Y3A6 229 aa13.9□□□□□ -0.18
COL9A3-209ENST00000469852 IGKV3D-11A0A0A0MRZ8 115 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 NKX2-8O15522 239 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 FGF17O60258 216 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 MYO1DO94832 1006 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 LRATO95237 230 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 TGDSO95455 350 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 G6PDP11413 515 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 LBPP18428 481 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 IL10P22301 178 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PPP2R1BP30154 601 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 EMP2P54851 167 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 TRA2BP62995 288 aaKnown RBP13.89□□□□□ -0.19
COL9A3-209ENST00000469852 ERVK-8P63133 956 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 GNGT1P63211 74 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 EMX2Q04743 252 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PTGR1Q14914 329 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 NXNQ6DKJ4 435 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 FAM71E1Q6IPT2 247 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 OGFOD2Q6N063 350 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 QSOX2Q6ZRP7 698 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PPP1R32Q7Z5V6 425 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 ACTRT2Q8TDY3 377 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 ADAMTS18Q8TE60 1221 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 GFM2Q969S9 779 aaKnown RBP13.89□□□□□ -0.19
COL9A3-209ENST00000469852 ANKRD9Q96BM1 317 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-209ENST00000469852 C8orf44Q96CB5 159 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PTCHD1Q96NR3 888 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
COL9A3-209ENST00000469852 MYNNQ9NPC7 610 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PRTFDC1Q9NRG1 225 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 MS4A12Q9NXJ0 267 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 CES1P1Q9UKY3 287 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 HS3ST3B1Q9Y662 390 aa13.89□□□□□ -0.19
COL9A3-209ENST00000469852 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 MASP2O00187 686 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 SOCS6O14544 535 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 RRP8O43159 456 aaKnown RBP13.88□□□□□ -0.19
COL9A3-209ENST00000469852 PRMT3O60678 531 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 ALOX12BO75342 701 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 VPS4BO75351 444 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 CD63P08962 238 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 PRKAR1AP10644 381 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 JAK1P23458 1154 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 OTX2P32243 289 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 BUD31P41223 144 aaPredicted RBP13.88□□□□□ -0.19
COL9A3-209ENST00000469852 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 DUSP2Q05923 314 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 ZNF750Q32MQ0 723 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 PLPP5Q8NEB5 264 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 DNAJB14Q8TBM8 379 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 FAM117AQ9C073 453 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 CPNE5Q9HCH3 593 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 PRDM9Q9NQV7 894 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 ASIC5Q9NY37 505 aa13.88□□□□□ -0.19
COL9A3-209ENST00000469852 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms