RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TRIM69Q86WT6 500 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TRIM48Q8IWZ4 208 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 VWA5B2Q8N398 1253 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 OR56A3Q8NH54 315 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 WDR48Q8TAF3 677 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 BTN2A2Q8WVV5 523 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 MSLNLQ96KJ4 702 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 VN1R3Q9BXE9 311 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 UCK2Q9BZX2 261 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 TXNL4BQ9NX01 149 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 HEPACAM2A8MVW5 462 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ERVH48-1M5A8F1 160 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 NPC1O15118 1278 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 KPNA5O15131 536 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 PLA2G10O15496 165 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ADAP00813 363 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 KIR2DL3P43628 341 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TM4SF4P48230 202 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 HNRNPA0Q13151 305 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ILKQ13418 452 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM209AQ5JX71 171 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 CEACAM20Q6UY09 585 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 KLHDC8AQ8IYD2 350 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 PPCDCQ96CD2 204 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 REPS1Q96D71 796 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TSSK6Q9BXA6 273 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ELAC1Q9H777 363 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ACOXLQ9NUZ1 547 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 SH2B3Q9UQQ2 575 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ANGPT4Q9Y264 503 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 SSTR4P31391 388 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 SOAT1P35610 550 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 GNG2P59768 71 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 C2orf80Q0P641 193 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 MLLT11Q13015 90 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 SAXO2Q658L1 398 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TXNDC8Q6A555 127 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 XKRXQ6PP77 449 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TMPRSS11BQ86T26 416 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 GPR65Q8IYL9 337 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 PROKR2Q8NFJ6 384 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 RNF121Q9H920 327 aa12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 LGI1O95970 557 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 CHRM5P08912 532 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 MLLT3P42568 568 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 CCL23P55773 120 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 SNRPD1P62314 119 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 MFSD4BQ5TF39 518 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 ERAP2Q6P179 960 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 MED27Q6P2C8 311 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 MMP21Q8N119 569 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 TCEANCQ8N8B7 351 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 LMNTD1Q8N9Z9 388 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 GPR32P1Q8NGA4 272 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 C16orf78Q8WTQ4 265 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 JPH3Q8WXH2 748 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 RACGAP1Q9H0H5 632 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 ZDHHC6Q9H6R6 413 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 RPL36Q9Y3U8 105 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 A0A0G2JMP0 313 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 SMIM30A4D0T7 59 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 TMCC2O75069 709 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 IL1AP01583 271 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 ELAVL4P26378 380 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 GPC1P35052 558 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 GPNMBQ14956 572 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM214AQ32MH5 1076 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 C22orf42Q6IC83 251 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 FAM180BQ6P0A1 224 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 OR9Q1Q8NGQ5 310 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 UBASH3BQ8TF42 649 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 RASSF5Q8WWW0 418 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 DIRAS2Q96HU8 199 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 FRMD6Q96NE9 622 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 PRRG3Q9BZD7 231 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 YARS2Q9Y2Z4 477 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-205ENST00000466780 LRRTM2O43300 516 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 TSPAN6O43657 245 aa12.36□□□□□ -0.43
PDZRN3-205ENST00000466780 AP2A2O94973 939 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms