RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NDOR1Q9UHB4 597 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NUFIP1Q9UHK0 495 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 UTS2RQ9UKP6 389 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DIMT1Q9UNQ2 313 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 EXOSC1Q9Y3B2 195 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TIMM13Q9Y5L4 95 aaPredicted RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ENPP4Q9Y6X5 453 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CHD5Q8TDI0 1954 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 A0A1B0GVM2 712 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 A0A1W2PQ67 120 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 A0A1W2PQL4 384 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM129A0AVI4 362 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CASTOR2A6NHX0 329 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM189-UBE2V1I3L0A0 370 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PLD2O14939 933 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SYN3O14994 580 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SCAMP2O15127 329 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SMAD6O43541 496 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SGTAO43765 313 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SH3BP5O60239 455 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ACSL4O60488 711 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 MTRF1O75570 445 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 OAZ2O95190 189 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SNAI1O95863 264 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 OR56A5P0C7T3 313 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PIRTP0C851 137 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CPEP16870 476 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF30P17039 623 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 GSTM3P21266 225 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CBLP22681 906 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ACRV1P26436 265 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 FGF9P31371 208 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ACVRL1P37023 503 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 IFNGR2P38484 337 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SPAM1P38567 509 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CDH12P55289 794 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CLDN20P56880 219 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 WDR5P61964 334 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 RACK1P63244 317 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CYP4F2P78329 520 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CACNB2Q08289 660 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ILKQ13418 452 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PTPRCAPQ14761 206 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 HEPACAMQ14CZ8 416 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 VEPH1Q14D04 833 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PTGES3Q15185 160 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 RGNQ15493 299 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 TATDN3Q17R31 274 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 EXOC3L2Q2M3D2 409 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PLK5Q496M5 336 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CDONQ4KMG0 1287 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 CRB2Q5IJ48 1285 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 C3orf38Q5JPI3 329 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 FRMPD2BQ6IN97 320 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 KLHL17Q6TDP4 642 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 VTCN1Q7Z7D3 282 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ANKRD46Q86W74 232 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SERPINA9Q86WD7 417 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 AMIGO1Q86WK6 493 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 PIANPQ8IYJ0 282 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC22A15Q8IZD6 547 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 GJD3Q8N144 294 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 NANOGP1Q8N7R0 232 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 YIPF7Q8N8F6 280 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 DCBLD1Q8N8Z6 715 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 TRPV1Q8NER1 839 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 MDGA1Q8NFP4 955 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 OR52N2Q8NGI0 321 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 GOT1L1Q8NHS2 421 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM163Q8TC26 289 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 OVCA2Q8WZ82 227 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 IGSF8Q969P0 613 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ESAMQ96AP7 390 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SH3KBP1Q96B97 665 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 COQ8BQ96D53 544 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 APOLD1Q96LR9 279 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ZSWIM3Q96MP5 696 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF578Q96N58 590 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 QRFPRQ96P65 431 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 BARD1Q99728 777 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 C7orf50Q9BRJ6 194 aaKnown RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 MARVELD1Q9BSK0 173 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ACAT2Q9BWD1 397 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC12A9Q9BXP2 914 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ACTR6Q9GZN1 396 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 C11orf54Q9H0W9 315 aaPredicted RBP6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 MED28Q9H204 178 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ASB8Q9H765 288 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 NMUR1Q9HB89 426 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC25A19Q9HC21 320 aa6.87□□□□□ -1.31
CLSTN1-204ENST00000464286 ZFP64Q9NPA5 681 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms