RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ELAVL3Q14576 367 aaKnown RBP16.12■□□□□ 0.17
ACTB-207ENST00000462494 INAVAQ3KP66 663 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 SZRD1Q7Z422 152 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 CACUL1Q86Y37 369 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 DCUN1D3Q8IWE4 304 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 AMER2Q8N7J2 671 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 VANGL1Q8TAA9 524 aaPredicted RBP16.12■□□□□ 0.17
ACTB-207ENST00000462494 SPPL3Q8TCT6 385 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 TM4SF18Q96CE8 201 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 PDXPQ96GD0 296 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 TMEM19Q96HH6 336 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 PPP1R16AQ96I34 528 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 MAPKAP1Q9BPZ7 522 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 CENPOQ9BU64 300 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 ANKHQ9HCJ1 492 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 ICKQ9UPZ9 632 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 SLC27A6Q9Y2P4 619 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 OTOL1A6NHN0 477 aaPredicted RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 H7BY64 318 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 HOXC11O43248 304 aaPredicted RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 PCCBP05166 539 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ALOX5P09917 674 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 BMPR1AP36894 532 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 FBXO43Q4G163 708 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 DEPDC1Q5TB30 811 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 FRMPD2BQ6IN97 320 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 SPRED2Q7Z698 418 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 SLC30A8Q8IWU4 369 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 CADM3Q8N126 398 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 CLIP4Q8N3C7 705 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 KIAA1958Q8N8K9 716 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 NEURL3Q96EH8 262 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 PRAP1Q96NZ9 151 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 OR5M11Q96RB7 305 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 IL4I1Q96RQ9 567 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 AIF1LQ9BQI0 150 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 CLN6Q9NWW5 311 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ENOPH1Q9UHY7 261 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 IFT52Q9Y366 437 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ALPK3Q96L96 1907 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 DSCR3O14972 297 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ZW10O43264 779 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 SOX14O95416 240 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 RB1P06400 928 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ADRA2AP08913 450 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 FEN1P39748 380 aaKnown RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 EIF2DP41214 584 aaKnown RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 EIF2B2P49770 351 aaKnown RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 ZNF234Q14588 700 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 HEPACAMQ14CZ8 416 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 EIF4HQ15056 248 aaKnown RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 SAXO2Q658L1 398 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 DEF8Q6ZN54 512 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 C6orf120Q7Z4R8 191 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 HEATR4Q86WZ0 1026 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 OR5P2Q8WZ92 322 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ITFG2Q969R8 447 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 Q96MT0 163 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 RAD9AQ99638 391 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 ZNF717Q9BY31 904 aaPredicted RBP16.11■□□□□ 0.17
ACTB-207ENST00000462494 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 FTSJ1Q9UET6 329 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 TMCC3Q9ULS5 477 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
ACTB-207ENST00000462494 A0A0G2JN53 185 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 ANTXRLA6NF34 631 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 ZAR1LA6NP61 321 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 HEPACAM2A8MVW5 462 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 TBX1O43435 398 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 SERPIND1P05546 499 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 BSGP35613 385 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 SEPHS1P49903 392 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 TEKQ02763 1124 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 SLC13A2Q13183 592 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 TP53BP2Q13625 1128 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 ERN2Q76MJ5 926 aaKnown RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 TRIM73Q86UV7 250 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 KBTBD8Q8NFY9 601 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 CRELD1Q96HD1 420 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 EFCAB10A6NFE3 127 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 AGAP5A6NIR3 686 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 CAPN5O15484 640 aaPredicted RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 OR10H3O60404 316 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 UPK1BO75841 260 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 IGFBP1P08833 259 aaPredicted RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
ACTB-207ENST00000462494 S100A5P33763 92 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 OLR1P78380 273 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 TSTQ16762 297 aaKnown RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 TPRG1LQ5T0D9 272 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 RBM45Q8IUH3 476 aaKnown RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 ETFBKMTQ8IXQ9 262 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 GPR32P1Q8NGA4 272 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 WDR36Q8NI36 951 aaKnown RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 LGR4Q9BXB1 951 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 MS4A8Q9BY19 250 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
ACTB-207ENST00000462494 PAIP2BQ9ULR5 123 aaKnown RBP16.1■□□□□ 0.17
ACTB-207ENST00000462494 TSC22D4Q9Y3Q8 395 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms