RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SLAMF1Q13291 335 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 GTF2H2Q13888 395 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 SP5Q6BEB4 398 aaPredicted RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 GTF2H2CQ6P1K8 395 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 METTL2BQ6P1Q9 378 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 CHERPQ8IWX8 916 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 GPALPP1Q8IXQ4 340 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 C7orf57Q8NEG2 295 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 IFT81Q8WYA0 676 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 ZNF592Q92610 1267 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 ISL2Q96A47 359 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 MTERF1Q99551 399 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 CENPKQ9BS16 269 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 OR8D2Q9GZM6 311 aa17.61■□□□□ 0.41
VARS-220ENST00000461874 CPSF2Q9P2I0 782 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 TNPO3Q9Y5L0 923 aaKnown RBP17.61■□□□□ 0.41
VARS-220ENST00000461874 PLPP1O14494 284 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 SIX3O95343 332 aaPredicted RBP17.6■□□□□ 0.41
VARS-220ENST00000461874 INHBAP08476 426 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
VARS-220ENST00000461874 MAGEA12P43365 314 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 RAP1GDS1P52306 607 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 ARFIP1P53367 373 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 IGLV3-21P80748 117 aaPredicted RBP17.6■□□□□ 0.41
VARS-220ENST00000461874 HSF1Q00613 529 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 TECRLQ5HYJ1 363 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 GOLGA7Q7Z5G4 137 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 ZCCHC7Q8N3Z6 543 aaKnown RBP17.6■□□□□ 0.41
VARS-220ENST00000461874 ZNF321PQ8N8H1 164 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 MNS1Q8NEH6 495 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 OR8K3Q8NH51 312 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 SLC2A12Q8TD20 617 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 REPS1Q96D71 796 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 IPPKQ9H8X2 491 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 TIMMDC1Q9NPL8 285 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 ZNF358Q9NW07 568 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 MS4A12Q9NXJ0 267 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 ERVK-11Q9UQG0 969 aa17.6■□□□□ 0.41
VARS-220ENST00000461874 KLF2Q9Y5W3 355 aaPredicted RBP17.6■□□□□ 0.41
VARS-220ENST00000461874 A8MVJ9 347 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 WWP2O00308 870 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ZNHIT1O43257 154 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 HNRNPRO43390 633 aaKnown RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 FGF17O60258 216 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ETHE1O95571 254 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ESRRAP11474 423 aaPredicted RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 ECHS1P30084 290 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 RFC3P40938 356 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 PIK3CGP48736 1102 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 HK2P52789 917 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 RPS13P62277 151 aaKnown RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 RNF4P78317 190 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 PHEXP78562 749 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ADORA2A-AS1P86434 159 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 CPSF6Q16630 551 aaKnown RBP eCLIP17.59■□□□□ 0.41
VARS-220ENST00000461874 BNC2Q6ZN30 1099 aaPredicted RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 FGD2Q7Z6J4 655 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 GPR180Q86V85 440 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 OR4N5Q8IXE1 308 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 L3MBTL4Q8NA19 623 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ZFP62Q8NB50 900 aaPredicted RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 C16orf52Q8NHV5 167 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ASB15Q8WXK1 588 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 RASL10BQ96S79 203 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 FMO2Q99518 471 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ZNF717Q9BY31 904 aaPredicted RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 RPF2Q9H7B2 306 aaKnown RBP17.59■□□□□ 0.41
VARS-220ENST00000461874 HPF1Q9NWY4 346 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 PSD3Q9NYI0 1048 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 MEMO1Q9Y316 297 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 RNF11Q9Y3C5 154 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 ATG4BQ9Y4P1 393 aa17.59■□□□□ 0.41
VARS-220ENST00000461874 MYO9AB2RTY4 2548 aa17.58■□□□□ 0.41
VARS-220ENST00000461874 TFECO14948 347 aaPredicted RBP17.58■□□□□ 0.4
VARS-220ENST00000461874 OR6B1O95007 311 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 TUBB4AP04350 444 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 RBP1P09455 135 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 CTAGE8P0CG41 777 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 ABOP16442 354 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 PTGER1P34995 402 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 SOX3P41225 446 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 STT3AP46977 705 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 SERPINB9P50453 376 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 GPR85P60893 370 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 BIKQ13323 160 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 GLE1Q53GS7 698 aaKnown RBP17.58■□□□□ 0.4
VARS-220ENST00000461874 C18orf63Q68DL7 685 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 XKRXQ6PP77 449 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 IL20RBQ6UXL0 311 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 CTAGE4Q8IX94 777 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 PTGR2Q8N8N7 351 aaPredicted RBP17.58■□□□□ 0.4
VARS-220ENST00000461874 PSD4Q8NDX1 1056 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 OR5L2Q8NGL0 311 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 WDR20Q8TBZ3 569 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 ZNF721Q8TF20 911 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 SREK1Q8WXA9 508 aaKnown RBP17.58■□□□□ 0.4
VARS-220ENST00000461874 TANKQ92844 425 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 MARVELD3Q96A59 401 aa17.58■□□□□ 0.4
VARS-220ENST00000461874 PAFAH2Q99487 392 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms