RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DRD1P21728 446 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 NR4A1P22736 598 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CMPK1P30085 196 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 NCBP2P52298 156 aaKnown RBP eCLIP11.18□□□□□ -0.625e-11■□□□□ 9
VTA1-203ENST00000452973 SLC9A5Q14940 896 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZNF630Q2M218 657 aaPredicted RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 C18orf63Q68DL7 685 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 BORAQ6PGQ7 559 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZNF773Q6PK81 442 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CCDC116Q8IYX3 515 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ACOT4Q8N9L9 421 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 KCT2Q8NC54 265 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 C12orf43Q96C57 262 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 WDR92Q96MX6 357 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 RAB11FIP5Q9BXF6 653 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ANKRA2Q9H9E1 313 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 GSAPA4D1B5 854 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 CHRM5P08912 532 aaPredicted RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 HOXB6P17509 224 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 CDK5R2Q13319 367 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 NFATC4Q14934 902 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 LAIR2Q6ISS4 152 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 HDAC2Q92769 488 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 MS4A6EQ96DS6 147 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 TMEM19Q96HH6 336 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 MSLNLQ96KJ4 702 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 RHNO1Q9BSD3 238 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 TMEM38AQ9H6F2 299 aa11.18□□□□□ -0.62
VTA1-203ENST00000452973 ZCCHC3Q9NUD5 404 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
VTA1-203ENST00000452973 SLC1A7O00341 560 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 ZW10O43264 779 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 OR12D1P0DN82 309 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 ARAFP10398 606 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 HNRNPA2B1P22626 353 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 RBBP4Q09028 425 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 REEP3Q6NUK4 255 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 Q6ZS52 159 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 PARP8Q8N3A8 854 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 SLC5A8Q8N695 610 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 VANGL1Q8TAA9 524 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 YTHDF1Q9BYJ9 559 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 DDX31Q9H8H2 851 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 PADI2Q9Y2J8 665 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 LYVE1Q9Y5Y7 322 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 SCN2AQ99250 2005 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 A0A0A6YYD5 115 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 TRIM64A6NGJ6 449 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 FOXD2O60548 495 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 UGT2B11O75310 529 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 ZBTB11O95625 1053 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 GABRG2P18507 467 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 POLR2CP19387 275 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 MAGP20916 626 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 RPP38P78345 283 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 BTN3A2P78410 334 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 HYAL2Q12891 473 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 EXOC3L2Q2M3D2 409 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 PRRT3Q5FWE3 981 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 RBM48Q5RL73 367 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 Q6ZSR6 202 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 PIWIL3Q7Z3Z3 882 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 ZNF761Q86XN6 746 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 TRIM48Q8IWZ4 208 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 GIPC3Q8TF64 312 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 GTPBP3Q969Y2 492 aaKnown RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 RAD21L1Q9H4I0 556 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 EQTNQ9NQ60 294 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 SIRT3Q9NTG7 399 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
VTA1-203ENST00000452973 SNX5Q9Y5X3 404 aa11.17□□□□□ -0.62
VTA1-203ENST00000452973 A0A0J9YVX5 310 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 A0A1W2PR48 441 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 LRRC72A6NJI9 287 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TRIM64CA6NLI5 447 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SLC16A6O15403 523 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SLC28A2O43868 658 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 VIPP01282 170 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 MATN1P21941 496 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 HIST1H1TP22492 207 aaPredicted RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 SERPINB1P30740 379 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 PCBP4P57723 403 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
VTA1-203ENST00000452973 NPRL3Q12980 569 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 GPR19Q15760 415 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SYPL1Q16563 259 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 CCDC81Q6ZN84 652 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 SPARTQ8N0X7 666 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 TTLQ8NG68 377 aa11.16□□□□□ -0.62
VTA1-203ENST00000452973 OR10G2Q8NGC3 310 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms