RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CAPRIN1Q14444 709 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ZIC1Q15915 447 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 SAMD4BQ5PRF9 694 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 CCNYL2Q5T2Q4 361 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PRR23BQ6ZRT6 265 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 NUDT13Q86X67 352 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ELMOD2Q8IZ81 293 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM132CQ8N3T6 1108 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RNF148Q8N7C7 305 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 GALNT11Q8NCW6 608 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 PMM1Q92871 262 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 REXO5Q96IC2 774 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ZC3H10Q96K80 434 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 ALPK1Q96QP1 1244 aa7.69□□□□□ -1.18
CCDC39-201ENST00000442201 LIN28AQ9H9Z2 209 aaKnown RBP7.69□□□□□ -1.18
CCDC39-201ENST00000442201 RTCAO00442 366 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 TRIM38O00635 465 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SCAMP2O15127 329 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 GPR37L1O60883 481 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 KCNH1O95259 989 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PROS1P07225 676 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 RPL3P39023 403 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PPM1FP49593 454 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PLA2G16P53816 162 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PLIN5Q00G26 463 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 BNC1Q01954 994 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PWP1Q13610 501 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 UGT8Q16880 541 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 C6orf132Q5T0Z8 1188 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 MSANTD1Q6ZTZ1 278 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 TICAM1Q8IUC6 712 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SLC25A45Q8N413 288 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SRFBP1Q8NEF9 429 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 OR7A2PQ8NGA2 310 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 DNAJB8Q8NHS0 232 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF420Q8TAQ5 688 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 DNAJB14Q8TBM8 379 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 C16orf78Q8WTQ4 265 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 GTF2H4Q92759 462 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 MARVELD3Q96A59 401 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 THAP11Q96EK4 314 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 TXNDC15Q96J42 360 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SORBS1Q9BX66 1292 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 KLHL25Q9H0H3 589 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 KCNN2Q9H2S1 579 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 MYNNQ9NPC7 610 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SLAMF8Q9P0V8 285 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM181Q9P2C4 612 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 POMT2Q9UKY4 750 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 POMPQ9Y244 141 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 WBP11Q9Y2W2 641 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 KLK4Q9Y5K2 254 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 BDP1A6H8Y1 2624 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SDK1Q7Z5N4 2213 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 RHPN2P1A8MT19 583 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 BMP10O95393 424 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 S100A6P06703 90 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 FAM58BPP0C7Q3 252 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SLC35G6P0C7Q6 338 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PVRP15151 417 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SLC6A2P23975 617 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 BSGP35613 385 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 SSR2P43308 183 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 MAPK12P53778 367 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 TAS2R50P59544 299 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 STXBP1P61764 594 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 RGS1Q08116 209 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 C2orf80Q0P641 193 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ADPRMQ3LIE5 342 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 C4orf46Q504U0 113 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 LPCAT4Q643R3 524 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 OR4F3Q6IEY1 312 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ZCCHC8Q6NZY4 707 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 FBXO42Q6P3S6 717 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 IKBIPQ70UQ0 350 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 R3HCC1LQ7Z5L2 792 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ASPGQ86U10 573 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 OR8J2Q8NGG1 315 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 BAHD1Q8TBE0 780 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ISOC1Q96CN7 298 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ITCHQ96J02 903 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 PPM1MQ96MI6 270 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ZFYVE21Q9BQ24 234 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 C17orf62Q9BQA9 187 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF717Q9BY31 904 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 REEP4Q9H6H4 257 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 FAM120CQ9NX05 1096 aaKnown RBP7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ZSCAN32Q9NX65 697 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ADAM29Q9UKF5 820 aa7.68□□□□□ -1.18
CCDC39-201ENST00000442201 ARHGEF17Q96PE2 2063 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TEX51A0A1B0GUA7 166 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 GABRR3A8MPY1 467 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ERI3O43414 337 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CTSVO60911 334 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ERN1O75460 977 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SORBS2O94875 1100 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 STATHP02808 62 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms