RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 FBXW8Q8N3Y1 598 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 LIX1Q8N485 282 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 OR14A16Q8NHC5 309 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 SLC2A12Q8TD20 617 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 MS4A6EQ96DS6 147 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 YIPF4Q9BSR8 244 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 NPLQ9BXD5 320 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-213ENST00000436675 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.22
HDAC8-213ENST00000436675 MTRF1LQ9UGC7 380 aaKnown RBP13.65□□□□□ -0.22
HDAC8-213ENST00000436675 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 MED12Q93074 2177 aa13.65□□□□□ -0.22
HDAC8-213ENST00000436675 HIVEP2P31629 2446 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 C15orf38-AP3S2A0A0A6YYH1 394 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 CYR61O00622 381 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 CTNSO60931 367 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 LDB3O75112 727 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 CD53P19397 219 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 LIM2P55344 173 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 C18orf21Q32NC0 220 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 CIARTQ8N365 385 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 NEIL3Q8TAT5 605 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 DOK4Q8TEW6 326 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 SIGLEC10Q96LC7 697 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF703Q9H7S9 590 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-213ENST00000436675 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 KCNE2Q9Y6J6 123 aa13.64□□□□□ -0.23
HDAC8-213ENST00000436675 LRRC3CA6NJW4 275 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 CLCA1A8K7I4 914 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 H2AFYO75367 372 aaKnown RBP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 ETHE1O95571 254 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 AHSGP02765 367 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 PTMSP20962 102 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 CEACAM8P31997 349 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 CXCR5P32302 372 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 GDF5P43026 501 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF136P52737 540 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 SLBPQ14493 270 aaKnown RBP eCLIP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 FBXL19-AS1Q494R0 122 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 PIGGQ5H8A4 983 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 ADNP2Q6IQ32 1131 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 TTC27Q6P3X3 843 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 ADGRD1Q6QNK2 874 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 SBSNQ6UWP8 590 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 KIF18BQ86Y91 864 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 FAM13CQ8NE31 585 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 MCUQ8NE86 351 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 EGFL8Q99944 293 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 COPS7BQ9H9Q2 264 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 ZFP64Q9NPA5 681 aa13.63□□□□□ -0.23
HDAC8-213ENST00000436675 BOKQ9UMX3 212 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-213ENST00000436675 A0A088AWK7 358 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 A0A1W2PPR1 153 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 NPEPPSL1A6NEC2 478 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 H7C1Q1 480 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 CDC7O00311 574 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 BANF1O75531 89 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 WDR47O94967 919 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 EPPINO95925 133 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 IL2RAP01589 272 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 C1GALT1C1LP0DN25 315 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF10P21506 573 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-213ENST00000436675 GDF1P27539 372 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 CRYMQ14894 314 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF791Q3KP31 576 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-213ENST00000436675 TRIM40Q6P9F5 258 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 OR8K3Q8NH51 312 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 ZNF721Q8TF20 911 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 SERINC2Q96SA4 455 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 REXO4Q9GZR2 422 aaKnown RBP13.62□□□□□ -0.23
HDAC8-213ENST00000436675 PROK2Q9HC23 129 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 BEX4Q9NWD9 120 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-213ENST00000436675 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 FOXD3Q9UJU5 478 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-213ENST00000436675 DAPP1Q9UN19 280 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 CAMK2AQ9UQM7 478 aa13.62□□□□□ -0.23
HDAC8-213ENST00000436675 ANKDD1BA6NHY2 528 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 AHRRA9YTQ3 701 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 ENO2P09104 434 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-213ENST00000436675 CCDC175P0C221 793 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 MAGEA3P43357 314 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 MTTPP55157 894 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 DUSP8Q13202 625 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 BBS9Q3SYG4 887 aa13.61□□□□□ -0.23
HDAC8-213ENST00000436675 Q5PR19 223 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms