RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 EHD3Q9NZN3 535 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 KCMF1Q9P0J7 381 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF282Q9UDV7 671 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ATP6V1HQ9UI12 483 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 UTS2RQ9UKP6 389 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 EXO1Q9UQ84 846 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ENTPD4Q9Y227 616 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 MAP4K5Q9Y4K4 846 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 TMEM184BQ9Y519 407 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 AK5Q9Y6K8 562 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 BLACEA4D250 179 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCDC154A6NI56 674 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCT8L1PA6NM43 557 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 STMND1H3BQB6 276 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 EBAG9O00559 213 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CYR61O00622 381 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLDN4O14493 209 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 PGRMC2O15173 223 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 NVLO15381 856 aaKnown RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 IL6P05231 212 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 PGRP06401 933 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCNYL3P0C7X3 344 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 LAMP1P11279 417 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 COX4I1P13073 169 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CAPN3P20807 821 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 MAOAP21397 527 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 IL10P22301 178 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 IL12AP29459 219 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC5A2P31639 672 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 HNRNPFP52597 415 aaKnown RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ID2Q02363 134 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 FOLH1Q04609 750 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CYLC2Q14093 348 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ERV3-1Q14264 604 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 NCF4Q15080 339 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 MMEL1Q495T6 779 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 VPS26BQ4G0F5 336 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF385BQ569K4 471 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 C6orf10Q5SRN2 563 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF385CQ66K41 422 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR4F3Q6IEY1 312 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM180BQ6P0A1 224 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 BLOC1S3Q6QNY0 202 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM198BQ6UWH4 519 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SHISA6Q6ZSJ9 500 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 COX15Q7KZN9 410 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANKRD46Q86W74 232 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 FUNDC1Q8IVP5 155 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR4N5Q8IXE1 308 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF595Q8IYB9 648 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ESX1Q8N693 406 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 TMEM52Q8NDY8 209 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR4K14Q8NGD5 310 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 TANKQ92844 425 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 UCN3Q969E3 161 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CIDECQ96AQ7 238 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 VPS33AQ96AX1 596 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 MIEF2Q96C03 454 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CMTM5Q96DZ9 223 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPDL1Q96EA4 605 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF764Q96H86 408 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR52E6Q96RD3 313 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 BBS4Q96RK4 519 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC25A23Q9BV35 468 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 DUSP26Q9BV47 211 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCDC106Q9BWC9 280 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SOX17Q9H6I2 414 aaPredicted RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC35C2Q9NQQ7 365 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRTFDC1Q9NRG1 225 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 THSD1Q9NS62 852 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC22A11Q9NSA0 550 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 TMEM45AQ9NWC5 275 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 NXT1Q9UKK6 140 aaKnown RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 KLK13Q9UKR3 277 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 PSME2Q9UL46 239 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 PADI1Q9ULC6 663 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 MKL2Q9ULH7 1088 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF780BQ9Y6R6 833 aa7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 SNRNP200O75643 2136 aaKnown RBP7.45□□□□□ -1.22
HMGA1P4-201ENST00000428643 LOC100653049A0A140TA62 436 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 A0A1W2PP18 115 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 DYTNA2CJ06 578 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 WASHC1A8K0Z3 465 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 GABRR3A8MPY1 467 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 BBIP1A8MTZ0 92 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CAPN14A8MX76 684 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 FGF17O60258 216 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR10H2O60403 315 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 BRINP1O60477 761 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 RAD1O60671 282 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 LDB3O75112 727 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 KRT34O76011 436 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 UBOX5O94941 541 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 BMP10O95393 424 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 CBX6O95503 412 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 DLGAP3O95886 979 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 HEXBP07686 556 aa7.44□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZGLP1P0C6A0 271 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms