RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 INAFM1C9JVW0 142 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PTGES3LE9PB15 166 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 G3V2L1 256 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF701M0R085 212 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TAF4O00268 1085 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF195O14628 629 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 AIM2O14862 343 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 MSI1O43347 362 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ERAL1O75616 437 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PIGNO95427 931 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 GSRP00390 522 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ADAP00813 363 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 VTNP04004 478 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 C2P06681 752 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 RBP1P09455 135 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SMIM18P0DKX4 95 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ERVK-10P10266 1014 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 COX7A2P14406 83 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 KCNE1P15382 129 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF23P17027 643 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 CD72P21854 359 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 GNL1P36915 607 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SLC26A3P40879 764 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 COMPP49747 757 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 THOP1P52888 689 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ART1P52961 327 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 UFM1P61960 85 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ESRRGP62508 458 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 MRPS22P82650 360 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 DLG1Q12959 904 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 IZUMO4Q1ZYL8 232 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 FAM83EQ2M2I3 478 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SOWAHAQ2M3V2 549 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 KCTD21Q4G0X4 260 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SLC9B1Q4ZJI4 515 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 DCAF6Q58WW2 860 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 COQ5Q5HYK3 327 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 BRMS1LQ5PSV4 323 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 LPCAT4Q643R3 524 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 KCTD11Q693B1 232 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 HMBOX1Q6NT76 420 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 FAM83HQ6ZRV2 1179 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 IKBIPQ70UQ0 350 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TRIM74Q86UV6 250 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TRIM73Q86UV7 250 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZC3HC1Q86WB0 502 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 CDR2LQ86X02 465 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 HPS6Q86YV9 775 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 CROCCP3Q8IVE0 287 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 DEFB106AQ8N104 65 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SCML4Q8N228 414 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 LRRC43Q8N309 656 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 CPXM2Q8N436 756 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 C12orf29Q8N999 325 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 OR52K1Q8NGK4 314 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 HM13Q8TCT9 377 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SLC2A14Q8TDB8 520 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 NT5C3BQ969T7 300 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 RCN3Q96D15 328 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 RMND5BQ96G75 393 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SMARCD1Q96GM5 515 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ATXN7L3BQ96GX2 97 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 FEM1CQ96JP0 617 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TSGA13Q96PP4 275 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 GCNAQ96QF7 691 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 LGMNQ99538 433 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TBL1YQ9BQ87 522 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 MED10Q9BTT4 135 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 KIFC1Q9BW19 673 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 C20orf27Q9GZN8 174 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TRPV6Q9H1D0 765 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PFDN4Q9NQP4 134 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ENTPD7Q9NQZ7 604 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ARHGEF38Q9NXL2 777 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 GTSE1Q9NYZ3 720 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 HSPB7Q9UBY9 170 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TUBGCP4Q9UGJ1 667 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PTBP2Q9UKA9 531 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SARDHQ9UL12 918 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 TMEM5Q9Y2B1 443 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ACOT9Q9Y305 439 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 PTGDR2Q9Y5Y4 395 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 LYVE1Q9Y5Y7 322 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 ZFC3H1O60293 1989 aaKnown RBP4.81□□□□□ -1.64
LINC00458-202ENST00000427299 SCN10AQ9Y5Y9 1956 aa4.81□□□□□ -1.64
LINC00458-202ENST00000427299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 KANSL1LA0AUZ9 987 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 TYW5A2RUC4 315 aaKnown RBP4.8□□□□□ -1.64
LINC00458-202ENST00000427299 OR6C75A6NL08 312 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 M0QZ92 97 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PIRO00625 290 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ZBTB14O43829 449 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 CNMDO75829 334 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 BEST1O76090 585 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 PPP1R3DO95685 299 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 MMP3P08254 477 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 IQCF3P0C7M6 154 aa4.8□□□□□ -1.64
LINC00458-202ENST00000427299 ZNF286BP0CG31 522 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms