RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 AMZ2Q86W34 360 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 CDC20BQ86Y33 519 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 ANKRD13BQ86YJ7 626 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 DOLPP1Q86YN1 238 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 CREBRFQ8IUR6 639 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 CPSF7Q8N684 471 aaKnown RBP4.59□□□□□ -1.67
SFXN1-202ENST00000421887 SIRT6Q8N6T7 355 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 OR11G2Q8NGC1 345 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 OR4E2Q8NGC2 313 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 SLC20A1Q8WUM9 679 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 PIH1D2Q8WWB5 315 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 ATG4AQ8WYN0 398 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 UBXN10Q96LJ8 280 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 PPM1MQ96MI6 270 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF599Q96NL3 588 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM120AQ9BXJ8 343 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 UCK2Q9BZX2 261 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 RAB6CQ9H0N0 254 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 SRMSQ9H3Y6 488 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 WDR54Q9H977 334 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF160Q9HCG1 818 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 RASSF1Q9NS23 344 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 SAMSN1Q9NSI8 373 aaKnown RBP4.59□□□□□ -1.67
SFXN1-202ENST00000421887 RLIMQ9NVW2 624 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 TAS2R14Q9NYV8 317 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 MYO1AQ9UBC5 1043 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 GRHPRQ9UBQ7 328 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 NOCTQ9UK39 431 aaKnown RBP4.59□□□□□ -1.67
SFXN1-202ENST00000421887 NXT1Q9UKK6 140 aaKnown RBP4.59□□□□□ -1.67
SFXN1-202ENST00000421887 MTMR6Q9Y217 621 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 PPIL1Q9Y3C6 166 aa4.59□□□□□ -1.67
SFXN1-202ENST00000421887 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.68
SFXN1-202ENST00000421887 PHF3Q92576 2039 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 STAB1Q9NY15 2570 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TCRBV5S1A1TA0A578 114 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 GTPBP10A4D1E9 387 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 RGSL1A5PLK6 1076 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 C2CD4BA6NLJ0 364 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 C2orf74A8MZ97 194 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ASNA1O43681 348 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 KLK8O60259 260 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 MTX2O75431 263 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CRLF1O75462 422 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TOXO94900 526 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 LSM8O95777 96 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 GNA14O95837 355 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 WDPCPO95876 746 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TPOP07202 933 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ANXA2P07355 339 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 SLC35G4P0C7Q5 338 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 KRT3P12035 628 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ST6GAL1P15907 406 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CMA1P23946 247 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 NDUFS1P28331 727 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 PRDX3P30048 256 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CDH5P33151 784 aaPredicted RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CARSP49589 748 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CTSCP53634 463 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ARSFP54793 590 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ARL4CP56559 192 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 HILS1P60008 231 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 RPS16P62249 146 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF33BQ06732 778 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 SLC5A12Q1EHB4 618 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF658Q5TYW1 1059 aaPredicted RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 MARC1Q5VT66 337 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TAF3Q5VWG9 929 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 PDPK2PQ6A1A2 396 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CNSTQ6PJW8 725 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 ARSKQ6UWY0 536 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 SHISA6Q6ZSJ9 500 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CDHR3Q6ZTQ4 885 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 BRSK1Q8TDC3 778 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TMEM255BQ8WV15 326 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 LCN9Q8WX39 176 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 GLYATL1Q969I3 302 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 NMD3Q96D46 503 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 LRRC46Q96FV0 321 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 SNX22Q96L94 193 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 C12orf66Q96MD2 445 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 MGME1Q9BQP7 344 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CRACR2AQ9BSW2 395 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CNPY3Q9BT09 278 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TRIM54Q9BYV2 358 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 MRPL46Q9H2W6 279 aaKnown RBP4.58□□□□□ -1.68
SFXN1-202ENST00000421887 CLSTN2Q9H4D0 955 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 KIR3DX1Q9H7L2 352 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 GPR35Q9HC97 309 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 OBP2BQ9NPH6 170 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 SLC24A2Q9UI40 661 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 POMT2Q9UKY4 750 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 FZD10Q9ULW2 581 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 RNF6Q9Y252 685 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 TTLL3Q9Y4R7 772 aa4.58□□□□□ -1.68
SFXN1-202ENST00000421887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.58□□□□□ -1.682e-6■□□□□ 10.8
SFXN1-202ENST00000421887 A0A1B0GVC2 190 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 A0A1B0GX78 115 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 BICDL2A1A5D9 508 aa4.57□□□□□ -1.68
SFXN1-202ENST00000421887 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms