RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NPAS2Q99743 824 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 AGPAT1Q99943 283 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 NEURL2Q9BR09 285 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TMEM43Q9BTV4 400 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SLC26A1Q9H2B4 701 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 MTIF3Q9H2K0 278 aaKnown RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 CHMP4BQ9H444 224 aaKnown RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 FAM124BQ9H5Z6 455 aaPredicted RBP4.46□□□□□ -1.7
LSM5-205ENST00000409952 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SLC52A3Q9NQ40 469 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TMEM30AQ9NV96 361 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 PLEK2Q9NYT0 353 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 SPATA7Q9P0W8 599 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 IL36AQ9UHA7 158 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 GRID1Q9ULK0 1009 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 OR2W1Q9Y3N9 320 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 COLEC10Q9Y6Z7 277 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 KIAA1217Q5T5P2 1943 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.7
LSM5-205ENST00000409952 TMEM272A0A1B0GTI8 110 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 ZNF732B4DXR9 585 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 CLDN5O00501 218 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 SPOPO43791 374 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 LCMT2O60294 686 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 BCAR3O75815 825 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 NDUFB8O95169 186 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 STAG3L3P0CL85 134 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 ZNF23P17027 643 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 ACADSBP45954 432 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 OR1G1P47890 313 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 RFX5P48382 616 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 AMTP48728 403 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 CCR4P51679 360 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 MECOMQ03112 1051 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 CSTF1Q05048 431 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 FOXF2Q12947 444 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 SQLEQ14534 574 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 LRIT3Q3SXY7 679 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 ASPRV1Q53RT3 343 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 SLC35D3Q5M8T2 416 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 RTL6Q6ICC9 239 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 OR7E24Q6IFN5 339 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 CAPN13Q6MZZ7 669 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 CDC42EP5Q6NZY7 148 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 CWC27Q6UX04 472 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 ZNF66Q6ZN08 573 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 GOLGA7Q7Z5G4 137 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 TMCO2Q7Z6W1 182 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 BIVMQ86UB2 503 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 DCP1BQ8IZD4 617 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 LMNTD1Q8N9Z9 388 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 NEXN-AS1Q8NBZ9 246 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 OR9K2Q8NGE7 335 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 OR4C15Q8NGM1 316 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 PHLDA1Q8WV24 401 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 SPRYD4Q8WW59 207 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 TMEM37Q8WXS4 190 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 STARD8Q92502 1023 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 BPIFA2Q96DR5 249 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 ABHD8Q96I13 439 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 IGSF21Q96ID5 467 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 HPDLQ96IR7 371 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 C3orf30Q96M34 536 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 SLC39A3Q9BRY0 314 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 POLR3CQ9BUI4 534 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 GSDMCQ9BYG8 508 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 STMN4Q9H169 189 aaPredicted RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 VIPAS39Q9H9C1 493 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 MEAF6Q9HAF1 191 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 PLAC1Q9HBJ0 212 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 RNF186Q9NXI6 227 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 KIAA1257Q9ULG3 409 aa4.45□□□□□ -1.7
LSM5-205ENST00000409952 DIMT1Q9UNQ2 313 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 PDS5AQ29RF7 1337 aaKnown RBP4.45□□□□□ -1.7
LSM5-205ENST00000409952 POLR2AP24928 1970 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 LOC105371242A0A075B767 164 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ARHGEF35A5YM69 484 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 SERINC4A6NH21 518 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 YJEFN3A6XGL0 299 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 WRBO00258 174 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 KLF11O14901 512 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ARPC3O15145 178 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 MID1O15344 667 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 SPRY3O43610 288 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 FCMRO60667 390 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 JAK2O60674 1132 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EML2O95834 649 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 S100A9P06702 114 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 TPM1P09493 284 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ANXA4P09525 319 aaPredicted RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 PNMTP11086 282 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 DBTP11182 482 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 UQCRC2P22695 453 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ACKR3P25106 362 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 RBMS1P29558 406 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 AHRP35869 848 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ANP32AP39687 249 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 NPY2RP49146 381 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms