RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 NDST2P52849 883 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ATXN3P54252 364 aaPredicted RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 EVCP57679 992 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 SRP54P61011 504 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 ABCE1P61221 599 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 SSTP61278 116 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ERVK-16P61578 105 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 BTG1P62324 171 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 PMP22Q01453 160 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 GFPT1Q06210 699 aaPredicted RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 LY6DQ14210 128 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 TMEM187Q14656 261 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 HEPACAMQ14CZ8 416 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 MTHFSDQ2M296 383 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 ZFP69Q49AA0 526 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 RFTN2Q52LD8 501 aaPredicted RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 TOR1AIP1Q5JTV8 583 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 LYPLAL1Q5VWZ2 237 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 PRAMEF7Q5VXH5 474 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 NKAIN2Q5VXU1 208 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OLFM4Q6UX06 510 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 CDHR3Q6ZTQ4 885 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ADAMTSL2Q86TH1 951 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 SLC22A16Q86VW1 577 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZFAND4Q86XD8 727 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 BATF2Q8N1L9 274 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 GVQW1Q8N7I0 195 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZNF485Q8NCK3 441 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 NUP37Q8NFH4 326 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OR9Q2Q8NGE9 314 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OR6M1Q8NGM8 313 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OR6F1Q8NGZ6 308 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OR4L1Q8NH43 312 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 OR4A16Q8NH70 328 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 GTF3AQ92664 365 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 P3H4Q92791 437 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 RAB39BQ96DA2 213 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 MRPL53Q96EL3 112 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 C14orf79Q96F83 325 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ART5Q96L15 291 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 CAPNS2Q96L46 248 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 SPATA13Q96N96 652 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 AGPAT1Q99943 283 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ABCG8Q9H221 673 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 MTIF3Q9H2K0 278 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 ZDHHC18Q9NUE0 388 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 DDX28Q9NUL7 540 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 NINJ2Q9NZG7 142 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 KLK11Q9UBX7 282 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 NARFQ9UHQ1 456 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 PLEKHA6Q9Y2H5 1048 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 STRAPQ9Y3F4 350 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 OR1A2Q9Y585 309 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 UBE4BO95155 1302 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 NPC1L1Q9UHC9 1359 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 IGKV3D-20A0A0C4DH25 116 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 IGHV3-38A0A0C4DH36 116 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 SHISA7A6NL88 538 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 A8MU76 341 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 C19orf81C9J6K1 198 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 OGTO15294 1046 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 PRPSAP2O60256 369 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 MAGEC1O60732 1142 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 PCP11498 1178 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 GPX3P22352 226 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 PRKACGP22612 351 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 SFNP31947 248 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 SLC6A12P48065 614 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 CLK1P49759 484 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 PRELPP51888 382 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 TMEM50BP56557 158 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 KCNK10P57789 538 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 HERV-K104P63124 156 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 WASHC5Q12768 1159 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZNF177Q13360 481 aaPredicted RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 ITPK1Q13572 414 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 PDK1Q15118 436 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 UPP1Q16831 310 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZSWIM7Q19AV6 140 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 MPPE1Q53F39 396 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 CES4AQ5XG92 561 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZNF613Q6PF04 617 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 TRIM65Q6PJ69 517 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 MFSD7Q6UXD7 560 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZNF497Q6ZNH5 498 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 CHMP1BQ7LBR1 199 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ITIH5Q86UX2 942 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 CARM1Q86X55 608 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 PHC2Q8IXK0 858 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 C11orf45Q8TAV5 145 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZNF519Q8TB69 540 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 HCAR2Q8TDS4 363 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 GPR148Q8TDV2 347 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 DQX1Q8TE96 717 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 U2AF1L4Q8WU68 220 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 CNRIP1Q96F85 164 aaPredicted RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 RAB40CQ96S21 281 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 OPRPNQ99935 248 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms