RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ZNF830Q96NB3 372 aaPredicted RBP0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF2Q9BSG1 426 aaPredicted RBP0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 ALKBH7Q9BT30 221 aaPredicted RBP0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 EHD1Q9H4M9 534 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 TBC1D22BQ9NU19 505 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 GDE1Q9NZC3 331 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 MMACHCQ9Y4U1 282 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 GPR179Q6PRD1 2367 aa0.38□□□□□ -2.35
RNU6-239P-201ENST00000390990 HEG1Q9ULI3 1381 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 MTCL1Q9Y4B5 1905 aaKnown RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 A0A1B0GVC2 190 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 A0A1W2PQ09 198 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZSCAN5BA6NJL1 495 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 TMCO5BA8MYB1 307 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF732B4DXR9 585 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 WDHD1O75717 1129 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 SCGB1D1O95968 90 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 PENKP01210 267 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 FHP07954 510 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 CCDC166P0CW27 439 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 PNMTP11086 282 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 CELP19835 753 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 CD34P28906 385 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ARHGDIAP52565 204 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 SUCLG1P53597 346 aaKnown RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 BIRC2Q13490 618 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 BECN1Q14457 450 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 PCLAFQ15004 111 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 RPS6KA1Q15418 735 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF630Q2M218 657 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ODF2Q5BJF6 829 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 C6orf163Q5TEZ5 329 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 FAM219BQ5XKK7 198 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 WDR25Q64LD2 544 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC25A34Q6PIV7 304 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 TMEM179BQ7Z7N9 219 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 SLC43A2Q8N370 569 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 CERS5Q8N5B7 392 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 CCDC26Q8TAB7 109 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 NEIL3Q8TAT5 605 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 SEC62Q99442 399 aaKnown RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 NOL11Q9H8H0 719 aaKnown RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ANKZF1Q9H8Y5 726 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 IL1RL2Q9HB29 575 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 UBE2TQ9NPD8 197 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 OLAHQ9NV23 265 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 IRAK4Q9NWZ3 460 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF586Q9NXT0 402 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 HAO2Q9NYQ3 351 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 TBC1D7Q9P0N9 293 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 MARCOQ9UEW3 520 aaPredicted RBP0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 TMEM98Q9Y2Y6 226 aa0.37□□□□□ -2.35
RNU6-239P-201ENST00000390990 NLRC5Q86WI3 1866 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 IGLV4-69A0A075B6H9 119 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RNF212BA8MTL3 300 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 IFRD1O00458 451 aaPredicted RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 P2RX6O15547 441 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 AIREO43918 545 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 MBD4O95243 580 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 TBX18O95935 607 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 PDGFRAP16234 1089 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 CDH5P33151 784 aaPredicted RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 XCR1P46094 333 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 STAT2P52630 851 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 HERVK_113P61574 105 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 LCP2Q13094 533 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 SERTAD2Q14140 314 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 KRT32Q14532 448 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RASA2Q15283 850 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 C15orf59Q2T9L4 293 aaPredicted RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 C17orf107Q6ZR85 190 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZBTB49Q6ZSB9 765 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RFPL4BQ6ZWI9 263 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 NLRP14Q86W24 1093 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 CALHM3Q86XJ0 350 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 MINDY1Q8N5J2 469 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 ZNF709Q8N972 641 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RELL2Q8NC24 303 aaPredicted RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 CAMKVQ8NCB2 501 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 CRYGNQ8WXF5 182 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 PTERQ96BW5 349 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RAB3CQ96E17 227 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 NRTNQ99748 197 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 C5orf66Q9H5L9 145 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 RPF1Q9H9Y2 349 aaKnown RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 EIF2B3Q9NR50 452 aaKnown RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 DDX25Q9UHL0 483 aaKnown RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 NCKAP1Q9Y2A7 1128 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 EXOC6BQ9Y2D4 811 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 CARHSP1Q9Y2V2 147 aaKnown RBP0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 FLVCR1Q9Y5Y0 555 aa0.36□□□□□ -2.35
RNU6-239P-201ENST00000390990 PCNX2A6NKB5 2137 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 RLFQ13129 1914 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 TRAV18A0A075B6X5 111 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 FAM166BA8MTA8 275 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 TMX2-CTNND1H3BSU7 103 aa0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.35□□□□□ -2.35
RNU6-239P-201ENST00000390990 CLDN4O14493 209 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms