RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 FP248Q71RG6 208 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NOL8Q76FK4 1167 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC80Q76M96 950 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ERN2Q76MJ5 926 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 COX15Q7KZN9 410 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DPPA4Q7L190 304 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LRRC8DQ7L1W4 858 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BEND5Q7L4P6 421 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RRAGAQ7L523 313 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GET4Q7L5D6 327 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SYT13Q7L8C5 426 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FASTKD5Q7L8L6 764 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HS2ST1Q7LGA3 356 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SHFQ7M4L6 423 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC29A4Q7RTT9 530 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TCF24Q7RTU0 167 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TCF23Q7RTU1 214 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 OLIG3Q7RTU3 272 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ASCL5Q7RTU5 278 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SCXQ7RTU7 201 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC16A13Q7RTY0 426 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TRMT1LQ7Z2T5 733 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TRPM8Q7Z2W7 1104 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NUP54Q7Z3B4 507 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC46A3Q7Z3Q1 461 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CACNA2D4Q7Z3S7 1137 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM220AQ7Z4H9 259 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM19A1Q7Z5A9 133 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR142Q7Z601 462 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR141Q7Z602 305 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SNX20Q7Z614 316 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PXKQ7Z7A4 578 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DEFB132Q7Z7B7 95 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CENPVQ7Z7K6 275 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GALNT5Q7Z7M9 940 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PHLDB2Q86SQ0 1253 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SDCCAG8Q86SQ7 713 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KIAA1328Q86T90 577 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TBC1D1Q86TI0 1168 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DPP9Q86TI2 863 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TADA2BQ86TJ2 420 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF554Q86TJ5 538 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PRUNE1Q86TP1 453 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ASPGQ86U10 573 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ISCA2Q86U28 154 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NOP9Q86U38 636 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 BIVMQ86UB2 503 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MARCH3Q86UD3 253 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC9B2Q86UD5 537 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPAT4Q86UL3 456 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NAA40Q86UY6 237 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NT5DC3Q86UY8 548 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 VASH2Q86V25 355 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PNMA8AQ86V59 439 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF429Q86V71 674 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PIM3Q86V86 326 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM160B2Q86V87 743 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KBTBD6Q86V97 674 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 MORC1Q86VD1 984 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC25A42Q86VD7 318 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SERINC5Q86VE9 423 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LRRTM4Q86VH4 590 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 EXOC3L1Q86VI1 746 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 IQCHQ86VS3 1027 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 COMTD1Q86VU5 262 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RY8Q86VZ1 359 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZSCAN30Q86W11 494 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PARGQ86W56 976 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ZC3HC1Q86WB0 502 aaKnown RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP1R27Q86WC6 154 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 SERPINA9Q86WD7 417 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PAQR7Q86WK9 346 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GPBP1Q86WP2 473 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM69Q86WT6 500 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HEATR4Q86WZ0 1026 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RALGPS2Q86X27 583 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ERICH1Q86X53 443 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NUDT13Q86X67 352 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 NIT1Q86X76 327 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 VSIG1Q86XK7 387 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CEP57Q86XR8 500 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF130Q86XS8 419 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CACUL1Q86Y37 369 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAAF5Q86Y56 855 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LYPD6Q86Y78 171 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 PALB2Q86YC2 1186 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM25Q86YD3 366 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 ANKRD13BQ86YJ7 626 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GATAD2AQ86YP4 633 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB11FIP4Q86YS3 637 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 HIPK1Q86Z02 1210 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KLBQ86Z14 1044 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TMC8Q8IU68 726 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 KRTAP8-1Q8IUC2 63 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 GALNT13Q8IUC8 556 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 CREBRFQ8IUR6 639 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 TBC1D10CQ8IV04 446 aa-0.08□□□□□ -2.42
TRAJ54-201ENST00000390484 LACC1Q8IV20 430 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms