RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 COQ5Q5HYK3 327 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PAGE2BQ5JRK9 111 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WDR45BQ5MNZ6 344 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PRAMEF14Q5SWL7 426 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 C6orf163Q5TEZ5 329 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CACHD1Q5VU97 1274 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 FAM219BQ5XKK7 198 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CD276Q5ZPR3 534 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ATG9BQ674R7 924 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 BICRALQ6AI39 1079 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WASH2PQ6VEQ5 465 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ZFAND4Q86XD8 727 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 FAM129CQ86XR2 697 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 LRRC56Q8IYG6 542 aaPredicted RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 PGAM4Q8N0Y7 254 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ESX1Q8N693 406 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 FGF11Q92914 225 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 RCN3Q96D15 328 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WDR34Q96EX3 536 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PDXPQ96GD0 296 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 METTL2AQ96IZ6 378 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 ACPTQ9BZG2 426 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DPH1Q9BZG8 443 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 LRTM1Q9HBL6 345 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WASH6PQ9NQA3 447 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 GIMAP2Q9UG22 337 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 EIF3LQ9Y262 564 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 TDRKHQ9Y2W6 561 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 NDUFAF1Q9Y375 327 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WDFY4Q6ZS81 3184 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PDZK1P1A8MUH7 402 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 AIM2O14862 343 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CBFA2T3O75081 653 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CIB2O75838 187 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CFIP05156 583 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 NPPBP16860 134 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ITGAXP20702 1163 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 NDUFS1P28331 727 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SERPINF1P36955 418 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DIO3P55073 304 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 KCNK10P57789 538 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SRP54P61011 504 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 RPL38P63173 70 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 TBL3Q12788 808 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 RCAN2Q14206 197 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 HIST2H2ACQ16777 129 aaPredicted RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 REP15Q6BDI9 236 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 HIST2H2AA3Q6FI13 130 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 HACD2Q6Y1H2 254 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DBX2Q6ZNG2 339 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 TMPRSS11BQ86T26 416 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DEFB107AQ8IZN7 70 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 DSELQ8IZU8 1212 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 PCYOX1LQ8NBM8 494 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 GPR156Q8NFN8 814 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WDR20Q8TBZ3 569 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SLC5A11Q8WWX8 675 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 OR1E3Q8WZA6 343 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SMPDL3AQ92484 453 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 NEIL2Q969S2 332 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 UBE2E3Q969T4 207 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 BIRC7Q96CA5 298 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 CMTM7Q96FZ5 175 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 LIN37Q96GY3 246 aaPredicted RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 HBEGFQ99075 208 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 SERPINI1Q99574 410 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 THTPAQ9BU02 230 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 C1orf50Q9BV19 199 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 GPR174Q9BXC1 333 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 FARSBQ9NSD9 589 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 SACM1LQ9NTJ5 587 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 TRNAU1APQ9NX07 287 aaKnown RBP8.35□□□□□ -1.07
TPM3-213ENST00000368545 CIDEBQ9UHD4 219 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 ITGB1BP2Q9UKP3 347 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 WDR37Q9Y2I8 494 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 COLEC10Q9Y6Z7 277 aa8.35□□□□□ -1.07
TPM3-213ENST00000368545 FAM234BA2RU67 622 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 NR5A2O00482 541 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 NRP2O60462 931 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 PRAMEF4O60810 478 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 TMEM127O75204 238 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 SEC22BO75396 215 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 SLC22A3O75751 556 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 SEC24DO94855 1032 aaPredicted RBP8.34□□□□□ -1.07
TPM3-213ENST00000368545 SLC2A4P14672 509 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 CD22P20273 847 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 JAK1P23458 1154 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 PHEXP78562 749 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 KRT33BQ14525 404 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 SGO1Q5FBB7 561 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 KHDC1LQ5JSQ8 128 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 WASHC2DQ5SRD0 308 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 MED27Q6P2C8 311 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 CYP20A1Q6UW02 462 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms