RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 DDIT4LQ96D03 193 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TCEAL4Q96EI5 215 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 PGAM5Q96HS1 289 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 OR51B5Q9H339 312 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 C8orf33Q9H7E9 229 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 M0R233 179 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 DNM1LO00429 736 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 WNT7AO00755 349 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RGS9O75916 674 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 CH25HO95992 272 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CSTAP01040 98 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 AGTR1P30556 359 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 SLC11A1P49279 550 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RABGGTBP53611 331 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CD83Q01151 205 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZNF181Q2M3W8 571 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 KIAA0895LQ68EN5 471 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZC3H14Q6PJT7 736 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZFAND4Q86XD8 727 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 HS3ST5Q8IZT8 346 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ARL14Q8N4G2 192 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 POC1BQ8TC44 478 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TRIB2Q92519 343 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 FAM46BQ96A09 425 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 WACQ9BTA9 647 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 MAGIXQ9H6Y5 334 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 EBF2Q9HAK2 575 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 PARPBPQ9NWS1 579 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 UCKL1Q9NWZ5 548 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ICKQ9UPZ9 632 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CARD8Q9Y2G2 431 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CFAP20Q9Y6A4 193 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 TCRBV21S2A2A0A5A6 115 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 EME2A4GXA9 379 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 SLC22A31A6NKX4 558 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GPR89AB7ZAQ6 455 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 KLF8O95600 359 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 SYPP08247 313 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GPR89BP0CG08 455 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 C8orf89P0DMQ9 161 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RNH1P13489 461 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 XRCC1P18887 633 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 POLR2CP19387 275 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 FECHP22830 423 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 EDNRBP24530 442 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ACRV1P26436 265 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 IL1R2P27930 398 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RAB28P51157 221 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CLCN2P51788 898 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 POLR2HP52434 150 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 OR4D2P58180 307 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RING1Q06587 406 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ECH1Q13011 328 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GK3PQ14409 553 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TAS1R3Q7RTX0 852 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RABEPKQ7Z6M1 372 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 LIX1LQ8IVB5 337 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZNF611Q8N823 705 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 OR5J2Q8NH18 312 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ABHD5Q8WTS1 349 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 BARD1Q99728 777 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 HERPUD2Q9BSE4 406 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CIB4A0PJX0 185 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 TRIM64CA6NLI5 447 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 BHMG1C9JSJ3 638 aaPredicted RBP6.21□□□□□ -1.41
UPF2-201ENST00000356352 HCRTR2O43614 444 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 ARHGEF15O94989 841 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 GTF2F2P13984 249 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 HTR2AP28223 471 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 FOXN2P32314 431 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 KCNQ1P51787 676 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 RIDAP52758 137 aaKnown RBP6.21□□□□□ -1.41
UPF2-201ENST00000356352 SEMG2Q02383 582 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 HYAL2Q12891 473 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 NADK2Q4G0N4 442 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 VASH1Q7L8A9 365 aaPredicted RBP6.21□□□□□ -1.41
UPF2-201ENST00000356352 GRASPQ7Z6J2 395 aaPredicted RBP6.21□□□□□ -1.41
UPF2-201ENST00000356352 PIM3Q86V86 326 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 SLC22A16Q86VW1 577 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 CMTM8Q8IZV2 173 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 NUP43Q8NFH3 380 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 OR13C3Q8NGS6 347 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 RHEBL1Q8TAI7 183 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 FBXL18Q96ME1 805 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 OR5B12Q96R08 314 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 DOHHQ9BU89 302 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 DNTTIP1Q9H147 329 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 NCDNQ9UBB6 729 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 B4GALT6Q9UBX8 382 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 TEX264Q9Y6I9 313 aa6.21□□□□□ -1.41
UPF2-201ENST00000356352 SOBPA7XYQ1 873 aa6.21□□□□□ -1.42
UPF2-201ENST00000356352 CLCA1A8K7I4 914 aa6.21□□□□□ -1.42
UPF2-201ENST00000356352 AMY2BP19961 511 aa6.21□□□□□ -1.42
UPF2-201ENST00000356352 TIA1P31483 386 aaKnown RBP eCLIP6.21□□□□□ -1.42
UPF2-201ENST00000356352 VSX2P58304 361 aaPredicted RBP6.21□□□□□ -1.42
UPF2-201ENST00000356352 BDH1Q02338 343 aa6.21□□□□□ -1.42
UPF2-201ENST00000356352 RPL6Q02878 288 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms