RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RPLP0P6Q8NHW5 317 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 LCN9Q8WX39 176 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 TMEM168Q9H0V1 697 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 BRF2Q9HAW0 419 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 IL1RAPQ9NPH3 570 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 FAM20BO75063 409 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SOX14O95416 240 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 GPX2P18283 190 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 C5AR1P21730 350 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 MTAPQ13126 283 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ADGRF3Q8IZF5 1079 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 IL17RCQ8NAC3 791 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 FEVQ99581 238 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 C19orf43Q9BQ61 176 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 CD320Q9NPF0 282 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 AHSPQ9NZD4 102 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SLC28A2O43868 658 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SULT1C4O75897 302 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 DLGAP3O95886 979 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 RPN2P04844 631 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SMU1Q2TAY7 513 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 C6orf141Q5SZD1 244 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 TPRG1LQ5T0D9 272 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 UBE2Q1Q7Z7E8 422 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 RAB42Q8N4Z0 105 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 HDAC8Q9BY41 377 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 RERGLQ9H628 205 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF282Q9UDV7 671 aaPredicted RBP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 TBC1D29Q9UFV1 150 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 GRXCR2A6NFK2 248 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 PVRP15151 417 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF24P17028 368 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 MAPK9P45984 424 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 PPP2R2BQ00005 443 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 FCHO2Q0JRZ9 810 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 AQP6Q13520 282 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 DUSP7Q16829 419 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 SLC22A16Q86VW1 577 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 HIPK1Q86Z02 1210 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 RBM45Q8IUH3 476 aaKnown RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 OR13F1Q8NGS4 319 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 DACH2Q96NX9 599 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 PDPK1O15530 556 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 CEACAM5P06731 702 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 POLR2CP19387 275 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 CERS1P27544 350 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 GRK3P35626 688 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 ADPRHP54922 357 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 LASP1Q14847 261 aaKnown RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 KCNJ8Q15842 424 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 CLIP4Q8N3C7 705 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 SLC5A8Q8N695 610 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 HORMAD2Q8N7B1 307 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 GOLM1Q8NBJ4 401 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 KCT2Q8NC54 265 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 CHDHQ8NE62 594 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 CXorf40BQ96DE9 158 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 COL21A1Q96P44 957 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
TRIM4-201ENST00000349062 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
TRIM4-201ENST00000349062 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 TRBC2A0A5B9 178 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 HAT1O14929 419 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 FRS3O43559 492 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 HSMCR30P0CW71 290 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 HTR1BP28222 390 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 NCBP2P52298 156 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 SPATS1Q496A3 300 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 MFSD4BQ5TF39 518 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 C18orf63Q68DL7 685 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 METTL4Q8N3J2 472 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 KAT2AQ92830 837 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 UBE2E3Q969T4 207 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 STARD5Q9NSY2 213 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 FRYLO94915 3013 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 PCDH17O14917 1159 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 PGRMC2O15173 223 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 AQP9O43315 295 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 GPR37L1O60883 481 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms