RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PRPS2P11908 318 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ICAM2P13598 275 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ACPPP15309 386 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 PCSK2P16519 638 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 LBPP18428 481 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 TNNI3P19429 210 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 RRADP55042 308 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 OR4D2P58180 307 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 RPL38P63173 70 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 EMX2Q04743 252 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ZNF763Q0D2J5 394 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 IL10RAQ13651 578 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 DEFB109BQ30KR1 87 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 NDUFAF5Q5TEU4 345 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 OR52E8Q6IFG1 317 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 KIRREL2Q6UWL6 708 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 FAM47EQ6ZV65 393 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 NDUFAF7Q7L592 441 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ANKRD37Q7Z713 158 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 LRRC34Q8IZ02 419 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 SHISA5Q8N114 240 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 TMEM132CQ8N3T6 1108 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 FNDC5Q8NAU1 212 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 OR4K14Q8NGD5 310 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 SNRNP27Q8WVK2 155 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 RBM18Q96H35 190 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 CSF3RQ99062 836 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 EBPLQ9BY08 206 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ALOXE3Q9BYJ1 711 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 MEAF6Q9HAF1 191 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 MAN2B2Q9Y2E5 1009 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 POLR3HQ9Y535 204 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 USH1CQ9Y6N9 552 aa11.19□□□□□ -0.62
SPTLC1-202ENST00000337841 APC2O95996 2303 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 GLOD5A6NK44 160 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 SOCS6O14544 535 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 PGRMC2O15173 223 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 AIFM1O95831 613 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 IFNA16P05015 189 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 VIMP08670 466 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 IL3P08700 152 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 FURINP09958 794 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 BCKDHAP12694 445 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 DDX5P17844 614 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 MAOAP21397 527 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 PIK3R1P27986 724 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ASMTP46597 345 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ALDH9A1P49189 494 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 HNRNPFP52597 415 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 GUCY1A3Q02108 690 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 NXNQ6DKJ4 435 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 C19orf48Q6RUI8 117 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 IKBIPQ70UQ0 350 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 SPATA19Q7Z5L4 167 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 CLNKQ7Z7G1 428 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 TMEM151BQ8IW70 566 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 SCUBE1Q8IWY4 988 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 SAMD14Q8IZD0 417 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 FAM9CQ8IZT9 166 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 TMEM102Q8N9M5 508 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 TMEM52Q8NDY8 209 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ANKRD9Q96BM1 317 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 C8orf44Q96CB5 159 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 FCRL1Q96LA6 429 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 LPAR4Q99677 370 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 PELOQ9BRX2 385 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 TUBB6Q9BUF5 446 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 MYNNQ9NPC7 610 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 NECTIN3Q9NQS3 549 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 TEX10Q9NXF1 929 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ZNF780BQ9Y6R6 833 aa11.18□□□□□ -0.62
SPTLC1-202ENST00000337841 ACACAQ13085 2346 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 IGKV3D-11A0A0A0MRZ8 115 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 NSG1A0A0A6YYJ2 146 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 SDHDO14521 159 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 DYRK3O43781 588 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 EDF1O60869 148 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 DIAPH2O60879 1101 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 LDB3O75112 727 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 HPP00738 406 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 COX7A2P14406 83 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 XKP51811 444 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 AP2B1P63010 937 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 ERVK-8P63133 956 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms