RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ZUFSPQ96AP4 578 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 VPS33AQ96AX1 596 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 RGMAQ96B86 450 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 PRAP1Q96NZ9 151 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 FCRL4Q96PJ5 515 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 OR52E6Q96RD3 313 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 TRIM15Q9C019 465 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 STX18Q9P2W9 335 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 AP1M2Q9Y6Q5 423 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 A0A096LPI6 279 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 IGKV1-8A0A0C4DH67 115 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 A8MUI8 341 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 FXYD1O00168 92 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 PCDH7O60245 1069 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 CTSVO60911 334 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 ENTPD5O75356 428 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 PSMG1O95456 288 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC6A2P23975 617 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 GCKP35557 465 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 STAT5AP42229 794 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 KIR3DL1P43629 444 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 RPS15AP62244 130 aaKnown RBP15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 TGM3Q08188 693 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 CEACAM7Q14002 265 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 TMTC4Q5T4D3 741 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 FAM69BQ5VUD6 431 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 FAM219BQ5XKK7 198 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 FIGLAQ6QHK4 219 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 GPR155Q7Z3F1 870 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 COMMD6Q7Z4G1 85 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 GTF2H4Q92759 462 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 TCTN2Q96GX1 697 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF764Q96H86 408 aaPredicted RBP15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 MS4A8Q9BY19 250 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 MYNNQ9NPC7 610 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 STOML1Q9UBI4 398 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 PCDHA9Q9Y5H5 950 aa15.57■□□□□ 0.08
PDLIM1-201ENST00000329399 FER1L5A0AVI2 2057 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 GNG14A0A1W2PPG7 69 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 ASPDHA6ND91 283 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 NKX2-8O15522 239 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 TBX19O60806 448 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 SCRG1O75711 98 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 PDE5AO76074 875 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 MSL3P1P0C860 447 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC7A2P52569 658 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 FLOT2Q14254 428 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 PAGE3Q5JUK9 113 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 SPANXN4Q5MJ08 99 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 LRIF1Q5T3J3 769 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 ATP1A1-AS1Q5TC04 95 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 IRAK1BP1Q5VVH5 260 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF425Q6IV72 752 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 DLEU7Q6UYE1 221 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 TMEM151BQ8IW70 566 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC15A3Q8IY34 581 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 TMEM132CQ8N3T6 1108 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 COQ8BQ96D53 544 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 TSSK3Q96PN8 268 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 CGREF1Q99674 301 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 SLC6A20Q9NP91 592 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 STARD5Q9NSY2 213 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 CUEDC1Q9NWM3 386 aaPredicted RBP15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 ATP6V1HQ9UI12 483 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 HEATR5BQ9P2D3 2071 aa15.56■□□□□ 0.08
PDLIM1-201ENST00000329399 OR1F1O43749 312 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 GUCY1B2O75343 617 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 TGFB1P01137 390 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 HOXB6P17509 224 aaKnown RBP15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 RAE1P78406 368 aaKnown RBP15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 ABHD18Q0P651 414 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 NANOGP8Q6NSW7 305 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 TMEM126BQ8IUX1 230 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 MFSD9Q8NBP5 474 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 CT55Q8WUE5 264 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 TMEM125Q96AQ2 219 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 DPH7Q9BTV6 452 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 BHLHE41Q9C0J9 482 aaPredicted RBP15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 CHRNA10Q9GZZ6 450 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 REEP4Q9H6H4 257 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 NANOGQ9H9S0 305 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 LHX9Q9NQ69 397 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 BTNL2Q9UIR0 455 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 GMEB1Q9Y692 573 aa15.55■□□□□ 0.08
PDLIM1-201ENST00000329399 LOC105369274A0A096LPK9 316 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 LOC102723532A0A0G2JNH3 316 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 PRSS51A0A1B0GVH4 220 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ARHGAP10A1A4S6 786 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ACOT8O14734 319 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 SCAMP2O15127 329 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ZNF749O43361 778 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 ETHE1O95571 254 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 COX7A2P14406 83 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 PPIBP23284 216 aaKnown RBP15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 TACR1P25103 407 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 HTR1EP28566 365 aa15.54■□□□□ 0.08
PDLIM1-201ENST00000329399 RORAP35398 523 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms