RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 C17orf62Q9BQA9 187 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 BHLHE41Q9C0J9 482 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC6A13Q9NSD5 602 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ATAD3AQ9NVI7 634 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 MRPS2Q9Y399 296 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 PCNX2A6NKB5 2137 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 TCRBV5S2A0A599 114 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 HNRNPRO43390 633 aaKnown RBP17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 ERI3O43414 337 aaKnown RBP17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 SRPX2O60687 465 aaPredicted RBP17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 B3GALT4O96024 378 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 LAMP1P11279 417 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 GGT1P19440 569 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 IL10P22301 178 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 CDKN2CP42773 168 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 CLDN6P56747 220 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 RAB8AP61006 207 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 STXBP1P61764 594 aaKnown RBP17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 ZFP36L1Q07352 338 aaKnown RBP17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 PDE7AQ13946 482 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 GTDC1Q4AE62 458 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 TMTC4Q5T4D3 741 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 CALHM3Q86XJ0 350 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 OR2L5Q8NG80 312 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 OR10A6Q8NH74 314 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 C16orf78Q8WTQ4 265 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 RGMAQ96B86 450 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 QRFPRQ96P65 431 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 PHF12Q96QT6 1004 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 IKZF5Q9H5V7 419 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 GORASP2Q9H8Y8 452 aa17.77■□□□□ 0.43
EXOSC3-201ENST00000327304 FAM220BPB1ANY3 271 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 TMEM150CB9EJG8 249 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GMNNO75496 209 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GBAP04062 536 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 KLK1P06870 262 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF888P0CJ79 500 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 BSGP35613 385 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GSTM5P46439 218 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 INSM1Q01101 510 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 PRTGQ2VWP7 1150 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 TLDC1Q6P9B6 456 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 ABHD17CQ6PCB6 329 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 PAGE2Q7Z2X7 111 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GLRX5Q86SX6 157 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 PDSS2Q86YH6 399 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 ADGRG5Q8IZF4 528 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 OR52E4Q8NGH9 312 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 UTP15Q8TED0 518 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 N4BP2L2Q92802 583 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GAL3ST3Q96A11 431 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 MIEF2Q96C03 454 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 NSMCE2Q96MF7 247 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 TEFMQ96QE5 360 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 CENPKQ9BS16 269 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 SPRTNQ9H040 489 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 USP22Q9UPT9 525 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 EXO1Q9UQ84 846 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 GMEB1Q9Y692 573 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 SPTBP11277 2137 aa17.76■□□□□ 0.43
EXOSC3-201ENST00000327304 ELOVL7A1L3X0 281 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 RNASET2O00584 256 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 KLHL18O94889 574 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 FURINP09958 794 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ZCCHC18P0CG32 403 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 NCK1P16333 377 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 E2F1Q01094 437 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ABHD18Q0P651 414 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 C16orf72Q14CZ0 275 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 TMEM214Q6NUQ4 689 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF793Q6ZN11 406 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 RBM44Q6ZP01 1051 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ARHGEF39Q8N4T4 335 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 DTWD1Q8N5C7 304 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ZNF655Q8N720 491 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 AMER3Q8N944 861 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 PAPD5Q8NDF8 572 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 POP5Q969H6 163 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 NLNQ9BYT8 704 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 PIF1Q9H611 641 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 RPF2Q9H7B2 306 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ADAM29Q9UKF5 820 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 LRCH1Q9Y2L9 728 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 PCDHGA1Q9Y5H4 931 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 DMXL1Q9Y485 3027 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 EVPLLA8MZ36 301 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 H3BMH7 237 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 ZSCAN9O15535 394 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 GSNP06396 782 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 TPP2P29144 1249 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 GZMMP51124 257 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 POLE2P56282 527 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 C2orf80Q0P641 193 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 TRA2AQ13595 282 aaKnown RBP eCLIP17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 CYP51A1Q16850 503 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 LRRC36Q1X8D7 754 aa17.75■□□□□ 0.43
EXOSC3-201ENST00000327304 GRAMD1BQ3KR37 738 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms