RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 TRBV23OR9-2A0A075B6M9 112 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 AQP9O43315 295 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 PRLP01236 227 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 EIPR1Q53HC9 387 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-201ENST00000323668 Q6ZPB1 254 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-201ENST00000323668 GGHQ92820 318 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM19Q96HH6 336 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 FBXO10Q9UK96 956 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM98Q9Y2Y6 226 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 HSPB11Q9Y547 144 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 SHROOM3Q8TF72 1996 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 A0A1W2PQ72 361 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 RTCAO00442 366 aaKnown RBP14.1□□□□□ -0.15
TCOF1-201ENST00000323668 PRAMEF12O95522 483 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 NUDT7P0C024 238 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 LRRC32Q14392 662 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 TAS1R1Q7RTX1 841 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 FAM129CQ86XR2 697 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 OR56A1Q8NGH5 318 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 HMGCLL1Q8TB92 370 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 UBTD2Q8WUN7 234 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 IL17FQ96PD4 163 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 F2RL3Q96RI0 385 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 PAQR5Q9NXK6 330 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM88BA6NKF7 163 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 M0R129 80 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 ADAM12O43184 909 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 KLK8O60259 260 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 KCNK5O95279 499 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 HLA-DQA2P01906 255 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 IFNA16P05015 189 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 GSTT2P0CG29 244 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 GSTT2BP0CG30 244 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 GGTA1PQ4G0N0 100 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 FRMPD2BQ6IN97 320 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 SLC8B1Q6J4K2 584 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 SETD7Q8WTS6 366 aaKnown RBP14.1□□□□□ -0.15
TCOF1-201ENST00000323668 C17orf62Q9BQA9 187 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 GLOD5A6NK44 160 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 NOTOA8MTQ0 251 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 PEX11BO96011 259 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 SLC9A3P48764 834 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 AGAP7PQ5VUJ5 663 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 DHRS4L2Q6PKH6 230 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 RIMKLAQ8IXN7 391 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 SLC37A3Q8NCC5 494 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 OSTF1Q92882 214 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 BEX2Q9BXY8 128 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 IRF2BPLQ9H1B7 796 aa14.1□□□□□ -0.15
TCOF1-201ENST00000323668 MAP2K3P46734 347 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 PPP3R1P63098 170 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 RAB33AQ14088 237 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF551Q7Z340 670 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 OAFQ86UD1 273 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 COX18Q8N8Q8 333 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 OR8J2Q8NGG1 315 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 ZCCHC10Q8TBK6 192 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 P2RY12Q9H244 342 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 IRAK3Q9Y616 596 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF821O75541 412 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 STATHP02808 62 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 DDX6P26196 483 aaKnown RBP eCLIP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 MLLT1Q03111 559 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 TEAD2Q15562 447 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 KCNJ8Q15842 424 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 UAP1L1Q3KQV9 507 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 CATSPEREQ5SY80 951 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 BHLHA9Q7RTU4 235 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 LHFPL3Q86UP9 236 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 DNAJC22Q8N4W6 341 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 NEIL3Q8TAT5 605 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 ADAMTS16Q8TE57 1224 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 SPHK2Q9NRA0 654 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 CLCA3PQ9Y6N3 262 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 ANHXE9PGG2 379 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 INMT-MINDY4F8WBC2 141 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 NR4A2P43354 598 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 HNRNPFP52597 415 aaKnown RBP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 CTU2Q2VPK5 515 aaKnown RBP14.09□□□□□ -0.15
TCOF1-201ENST00000323668 CNKSR3Q6P9H4 555 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 FAM217AQ8IXS0 508 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 CADM2Q8N3J6 435 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 Q8N402 240 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM145Q8NBT3 493 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 NR4A3Q92570 626 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 NEIL2Q969S2 332 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 VMP1Q96GC9 406 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 TTYH2Q9BSA4 534 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 WDR26Q9H7D7 661 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 TRIM36Q9NQ86 728 aa14.09□□□□□ -0.15
TCOF1-201ENST00000323668 C8orf89P0DMQ9 161 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 IDUAP35475 653 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 CSNK1DP48730 415 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 FPGSQ05932 587 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 GPR68Q15743 365 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 FAM219BQ5XKK7 198 aa14.08□□□□□ -0.15
TCOF1-201ENST00000323668 HLA-DQA1Q5Y7H0 255 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms