RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 M0R129 80 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 SPINT1O43278 529 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 C1orf105O95561 183 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 KLK1P06870 262 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 CISD3P0C7P0 127 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 CBLP22681 906 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 PRKACBP22694 351 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 EPHA5P54756 1037 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 RAE1P78406 368 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 DMC1Q14565 340 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 VMACQ2NL98 169 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 FAM78AQ5JUQ0 283 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 FAM83HQ6ZRV2 1179 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 NLRP8Q86W28 1048 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF707Q96C28 371 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 TIFAQ96CG3 184 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 DTD2Q96FN9 168 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 SLC30A2Q9BRI3 323 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 IL1RAPQ9NPH3 570 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ASIC5Q9NY37 505 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 C5AR2Q9P296 337 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 KIF17Q9P2E2 1029 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 KLHL42Q9P2K6 505 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 HMX3A6NHT5 357 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 NPC1O15118 1278 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ADH1CP00326 375 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 SOD1P00441 154 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 SERPIND1P05546 499 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ETFAP13804 333 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 RRM2P31350 389 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 RGS6P49758 472 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF385BQ569K4 471 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 COX20Q5RI15 118 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 METTL2BQ6P1Q9 378 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 P3H2Q8IVL5 708 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF547Q8IVP9 402 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 TRPM6Q9BX84 2022 aa14.84□□□□□ -0.03
SHROOM1-201ENST00000319854 C12orf71A8MTZ7 269 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 SLC16A5O15375 505 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 AP2A2O94973 939 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 PCDH8O95206 1070 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 CA3P07451 260 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 ADORA3P0DMS8 318 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 NPPBP16860 134 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 DNAJA1P31689 397 aaKnown RBP14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 KDELR2P33947 212 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 TGM4P49221 684 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 ZNF234Q14588 700 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 TBCEQ15813 527 aaPredicted RBP14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 MED27Q6P2C8 311 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 CELF5Q8N6W0 485 aaKnown RBP14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 KBTBD8Q8NFY9 601 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 RASSF5Q8WWW0 418 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 SLC7A6Q92536 515 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 SNAPC3Q92966 411 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 IRAK3Q9Y616 596 aa14.83□□□□□ -0.03
SHROOM1-201ENST00000319854 SCN2BO60939 215 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 C6orf47O95873 294 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 OR3A3P47888 321 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ALDH9A1P49189 494 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SRSF11Q05519 484 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 CAMK2GQ13555 558 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 CDKL4Q5MAI5 379 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 COMMD6Q7Z4G1 85 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 PTOV1Q86YD1 416 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 TRIM48Q8IWZ4 208 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ZZZ3Q8IYH5 903 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 C7orf61Q8IZ16 206 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 PIK3R3Q92569 461 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 OSGEPL1Q9H4B0 414 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 TIGARQ9NQ88 270 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 RAD18Q9NS91 495 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 MAN2B2Q9Y2E5 1009 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 GRIP1Q9Y3R0 1128 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 DYRK1BQ9Y463 629 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 A0A0B4J293 547 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ZNF197O14709 1029 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SLC9A3R1O14745 358 aaPredicted RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SCAMP2O15127 329 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 MRPS14O60783 128 aaKnown RBP14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 CDK1P06493 297 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ADRB3P13945 408 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 PTGER1P34995 402 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ARHGDIAP52565 204 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 TAS2R50P59544 299 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 DCDC1P59894 354 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 C2orf80Q0P641 193 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ELP6Q0PNE2 266 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 C9orf64Q5T6V5 341 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 GRHL2Q6ISB3 625 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SLCO4C1Q6ZQN7 724 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 SZRD1Q7Z422 152 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 C11orf96Q7Z7L8 435 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 UBE2J2Q8N2K1 259 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 ANGPTL6Q8NI99 470 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 OR8D1Q8WZ84 308 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 RNF31Q96EP0 1072 aa14.83□□□□□ -0.04
SHROOM1-201ENST00000319854 OR5M11Q96RB7 305 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms