RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 VPS26AO75436 327 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 LIMS3P0CW19 117 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 LIMS4P0CW20 117 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RPL17P18621 184 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF136P52737 540 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RPL38P63173 70 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ASAH1Q13510 395 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM52BQ4KMG9 183 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DNAJB7Q7Z6W7 309 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ABI3BPQ7Z7G0 1075 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 EXD3Q8N9H8 876 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 B3GNT7Q8NFL0 401 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RAD18Q9NS91 495 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SACM1LQ9NTJ5 587 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ACOXLQ9NUZ1 547 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 KCNE5Q9UJ90 142 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 CLIC1O00299 241 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ADAM11O75078 769 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PCDH8O95206 1070 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 IGFBP1P08833 259 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 HK1P19367 917 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 FMO3P31513 532 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 KCNJ5P48544 419 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 CSNK2BP67870 215 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 CHRNEQ04844 493 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PPP1R8Q12972 351 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PTGES3Q15185 160 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 SF3B4Q15427 424 aaKnown RBP eCLIP7.41□□□□□ -1.223e-6■■■■□ 24
CNOT4-201ENST00000315544 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 UNC5DQ6UXZ4 953 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 BIVMQ86UB2 503 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 LPCAT1Q8NF37 534 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 SREK1Q8WXA9 508 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 RNF32Q9H0A6 362 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 KCTD5Q9NXV2 234 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TXNDC16Q9P2K2 825 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 NOX1Q9Y5S8 564 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 C2orf81A6NN90 581 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF670-ZNF695F2Z2N8 137 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 LRRTM2O43300 516 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 RGS14O43566 566 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ATP6V1G1O75348 118 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 STK16O75716 305 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 DRD3P35462 400 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TRIM23P36406 574 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 MAD2L1Q13257 205 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TPBGQ13641 420 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM196Q5HYL7 178 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 DOK6Q6PKX4 331 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 FAM151BQ6UXP7 276 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 IKBIPQ70UQ0 350 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 STK32CQ86UX6 486 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 METTL23Q86XA0 190 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 NAT16Q8N8M0 369 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 WDR48Q8TAF3 677 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 MCOLN3Q8TDD5 553 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 MARVELD3Q96A59 401 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PGLYRP3Q96LB9 341 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 CCDC138Q96M89 665 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 FEVQ99581 238 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ADGRE3Q9BY15 652 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PRDM9Q9NQV7 894 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TRBV4-1A0A0J9YWV2 114 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 FAM221BA6H8Z2 402 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 B4DXG7 233 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 GSNP06396 782 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 IL10P22301 178 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 DHODHQ02127 395 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 SRSF11Q05519 484 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 RBBP4Q09028 425 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 MAP4K2Q12851 820 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ZIK1Q3SY52 487 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 SLC36A2Q495M3 483 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 C10orf62Q5T681 223 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 QSOX2Q6ZRP7 698 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PHC2Q8IXK0 858 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 NRSN1Q8IZ57 195 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 AHCYL2Q96HN2 611 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 TEFMQ96QE5 360 aaKnown RBP7.41□□□□□ -1.22
CNOT4-201ENST00000315544 ITPAQ9BY32 194 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 PLA2G12AQ9BZM1 189 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 OR51E2Q9H255 320 aa7.41□□□□□ -1.22
CNOT4-201ENST00000315544 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 MOCS2O96007 188 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PCNAP12004 261 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 TIA1P31483 386 aaKnown RBP eCLIP7.4□□□□□ -1.223e-7■■■■□ 24.4
CNOT4-201ENST00000315544 RCVRNP35243 200 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PRAMEP78395 509 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 WSCD2Q2TBF2 565 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 C10orf120Q5SQS8 335 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 MFSD4BQ5TF39 518 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 LIPIQ6XZB0 460 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 WDR88Q6ZMY6 472 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 DPY19L3Q6ZPD9 716 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 PPP1R14CQ8TAE6 165 aa7.4□□□□□ -1.22
CNOT4-201ENST00000315544 CIDECQ96AQ7 238 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms