RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IGSF9Q9P2J2 1179 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 RNF215Q9Y6U7 377 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 A0A1W2PPK0 400 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 A0A1W2PRU2 124 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 SCO2O43819 266 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CREG1O75629 220 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 ADH5P11766 374 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CELP19835 753 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 DAOAP59103 153 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 ERVK-16P61578 105 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 FKBP1AP62942 108 aaKnown RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 HGSNATQ68CP4 663 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TICAM1Q8IUC6 712 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PDZD9Q8IXQ8 264 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 DPCDQ9BVM2 203 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 FAM120CQ9NX05 1096 aaKnown RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 MS4A12Q9NXJ0 267 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 FBXL12Q9NXK8 326 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CLDND1Q9NY35 253 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TAS2R9Q9NYW1 312 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PRODH2Q9UF12 536 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 KCNK6Q9Y257 313 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 B3GALT1Q9Y5Z6 326 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TGFB1I1O43294 461 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PIP5K1CO60331 668 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 SOX9P48436 509 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 UBE2NP61088 152 aaKnown RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 RRAS2P62070 204 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 PON2Q15165 354 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CHRNA6Q15825 494 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 MOGQ16653 247 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 BAIAP2L2Q6UXY1 529 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TMIGD1Q6UXZ0 262 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CEACAM19Q7Z692 300 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 IQCKQ8N0W5 287 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 METTL27Q8N6F8 245 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 BANPQ8N9N5 519 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 SLC5A11Q8WWX8 675 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 TGM7Q96PF1 710 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PDZD7Q9H5P4 517 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PPP4R1LQ9P1A2 415 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 FNIP2Q9P278 1114 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 SLC7A8Q9UHI5 535 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CACNA1FO60840 1977 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 GMDSO60547 372 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CX3CR1P49238 355 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 WDR45BQ5MNZ6 344 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 MPP7Q5T2T1 576 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CARM1Q86X55 608 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 RNF130Q86XS8 419 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 IL22RA1Q8N6P7 574 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 ASCC1Q8N9N2 400 aaKnown RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 CYB5D2Q8WUJ1 264 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 GPR20Q99678 358 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 SYT3Q9BQG1 590 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 ACTR6Q9GZN1 396 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 ABRACLQ9P1F3 81 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 MANBAO00462 879 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 WDPCPO95876 746 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 GBAP04062 536 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CBSLP0DN79 551 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 CBSP35520 551 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 NAA10P41227 235 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 RPS13P62277 151 aaKnown RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 CYBRD1Q53TN4 286 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 JPH3Q8WXH2 748 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 TXN2Q99757 166 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 NAA11Q9BSU3 229 aaPredicted RBP10□□□□□ -0.81
CLIP1-201ENST00000302528 OR51B5Q9H339 312 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 FAM86C1Q9NVL1 165 aa10□□□□□ -0.81
CLIP1-201ENST00000302528 PAK4O96013 591 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CST3P01034 146 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 LPLP06858 475 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ACTC1P68032 377 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ACTA1P68133 377 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 GINS1Q14691 196 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ACSBG2Q5FVE4 666 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF776Q68DI1 518 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 BRAT1Q6PJG6 821 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM205Q6UW68 189 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DEFB119Q8N690 84 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 TRIB2Q92519 343 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 MMABQ96EY8 250 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 MAELQ96JY0 434 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 G6PC3Q9BUM1 346 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 DEFB126Q9BYW3 111 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PRTFDC1Q9NRG1 225 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PTBP2Q9UKA9 531 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 C12orf71A8MTZ7 269 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 HOXD8P13378 290 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ENDOUP21128 410 aaKnown RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 PRKACGP22612 351 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 AK4P27144 223 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-201ENST00000302528 GSK3BP49841 420 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RNF4P78317 190 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF45Q02386 682 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 SERINC3Q13530 473 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 RAET1LQ5VY80 246 aa9.99□□□□□ -0.81
CLIP1-201ENST00000302528 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms