RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CMPK2Q5EBM0 449 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 COX20Q5RI15 118 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 SAXO2Q658L1 398 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 FAM92BQ6ZTR7 304 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 CARFQ8N187 725 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 DNAJC9Q8WXX5 260 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 PIGKQ92643 395 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 FAM162AQ96A26 154 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 NEURL3Q96EH8 262 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 ZDHHC12Q96GR4 267 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 C10orf90Q96M02 699 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 CCDC3Q9BQI4 270 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 NLNQ9BYT8 704 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 AGPAT4Q9NRZ5 378 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 NLGN3Q9NZ94 848 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 ACSL6Q9UKU0 697 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 DAPP1Q9UN19 280 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 SCN3AQ9NY46 2000 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 PCDH15Q96QU1 1955 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 GLOD5A6NK44 160 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 TXNDC9O14530 226 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 KIF1CO43896 1103 aaKnown RBP15.47■□□□□ 0.07
TPM1-201ENST00000267996 NUDT7P0C024 238 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 FCGR1AP12314 374 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 PCGF2P35227 344 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 CDK9P50750 372 aaKnown RBP15.47■□□□□ 0.07
TPM1-201ENST00000267996 LIM2P55344 173 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 OR1D5P58170 312 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 TNFRSF17Q02223 184 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 EID3Q8N140 333 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 ANKFN1Q8N957 763 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 CATSPER1Q8NEC5 780 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 SAP25Q8TEE9 199 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 CNRIP1Q96F85 164 aaPredicted RBP15.47■□□□□ 0.07
TPM1-201ENST00000267996 ZNF681Q96N22 645 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 TGM7Q96PF1 710 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 ZNF184Q99676 751 aaPredicted RBP15.47■□□□□ 0.07
TPM1-201ENST00000267996 DPH2Q9BQC3 489 aaPredicted RBP15.47■□□□□ 0.07
TPM1-201ENST00000267996 ASPSCR1Q9BZE9 553 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 TMEM38AQ9H6F2 299 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 MS4A12Q9NXJ0 267 aa15.47■□□□□ 0.07
TPM1-201ENST00000267996 RNF103-CHMP3A0A140T963 221 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 B4GAT1O43505 415 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 GALR3O60755 368 aaPredicted RBP15.46■□□□□ 0.07
TPM1-201ENST00000267996 B4GALT2O60909 372 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 DNAJB6O75190 326 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 ETFAP13804 333 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 FASP25445 335 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 ALDH4A1P30038 563 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 NTSP30990 170 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 SOAT1P35610 550 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 CHI3L1P36222 383 aaPredicted RBP15.46■□□□□ 0.07
TPM1-201ENST00000267996 RBBP4Q09028 425 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 DEFB110Q30KQ9 67 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 IZUMO2Q6UXV1 221 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 PDSS2Q86YH6 399 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 FAM86B1Q8N7N1 296 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 OR5AK3PQ8NH89 298 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 ZFP28Q8NHY6 868 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 SUN3Q8TAQ9 357 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 NCSTNQ92542 709 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 NCLNQ969V3 563 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 BBS4Q96RK4 519 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 NPLQ9BXD5 320 aaPredicted RBP15.46■□□□□ 0.07
TPM1-201ENST00000267996 UGT2B28Q9BY64 529 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 DNAAF2Q9NVR5 837 aaKnown RBP15.46■□□□□ 0.07
TPM1-201ENST00000267996 ZSCAN32Q9NX65 697 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 SEMA5BQ9P283 1151 aa15.46■□□□□ 0.07
TPM1-201ENST00000267996 IGHV5-51A0A0C4DH38 117 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 YKT6O15498 198 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 C9P02748 559 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 CTSBP07858 339 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 RAP2AP10114 183 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 HOXB6P17509 224 aaKnown RBP15.45■□□□□ 0.06
TPM1-201ENST00000267996 CSNK2A2P19784 350 aaPredicted RBP15.45■□□□□ 0.06
TPM1-201ENST00000267996 CPN2P22792 545 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 KDELR2P33947 212 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 BUD31P41223 144 aaPredicted RBP15.45■□□□□ 0.06
TPM1-201ENST00000267996 GPLD1P80108 840 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 CFHR1Q03591 330 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 EEF1A2Q05639 463 aaKnown RBP15.45■□□□□ 0.06
TPM1-201ENST00000267996 HSPB3Q12988 150 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 LRRC36Q1X8D7 754 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 HLA-BQ31612 363 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 ZNF528Q3MIS6 628 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 FAM98BQ52LJ0 330 aaKnown RBP15.45■□□□□ 0.06
TPM1-201ENST00000267996 SFT2D3Q587I9 215 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 GCNT6Q5T4J0 391 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 NKAIN2Q5VXU1 208 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 ENPP6Q6UWR7 440 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 TMEM64Q6YI46 380 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 PRSS41Q7RTY9 318 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 AMIGO2Q86SJ2 522 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 RNF130Q86XS8 419 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 C11orf65Q8NCR3 313 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 SEPHS2Q99611 448 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 DUSP23Q9BVJ7 150 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 CHID1Q9BWS9 393 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 MAGIXQ9H6Y5 334 aa15.45■□□□□ 0.06
TPM1-201ENST00000267996 CAPN10Q9HC96 672 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms