RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TMEM121BQ9BXQ6 578 aaPredicted RBP22.06■■□□□ 1.12
MSX2-201ENST00000239243 AMBRA1Q9C0C7 1298 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 THEGQ9P2T0 379 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ENTPD2Q9Y5L3 495 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 FANCMQ8IYD8 2048 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 KIR2DS5A0A0G2JLQ3 304 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 A0A0G2JNG1 304 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 SPTY2D1-AS1A0A0U1RR47 76 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 TMEM229AB2RXF0 380 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 C5orf58C9J3I9 102 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 KIR2DS3K7RE56 304 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 SLC16A6O15403 523 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 TNFSF14O43557 240 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ZNF217O75362 1048 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 SNRNP200O75643 2136 aaKnown RBP22.06■■□□□ 1.12
MSX2-201ENST00000239243 STATHP02808 62 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 SLC35G6P0C7Q6 338 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ITGAMP11215 1152 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 MAGEA8P43361 318 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 CCT3P49368 545 aaKnown RBP22.06■■□□□ 1.12
MSX2-201ENST00000239243 KIR2DS5Q14953 304 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 CEP68Q76N32 757 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ARMC8Q8IUR7 673 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 TSTD1Q8NFU3 115 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 FLVCR1-AS1Q8TAF5 88 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 AMDHD1Q96NU7 426 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 OR2A14Q96R47 310 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 BBS4Q96RK4 519 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 MACROD1Q9BQ69 325 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ROGDIQ9GZN7 287 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 THSD1Q9NS62 852 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 ZNF451Q9Y4E5 1061 aa22.06■■□□□ 1.12
MSX2-201ENST00000239243 LOC100130705A0A1B0GUX0 176 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 C4orf51C9J302 202 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 DIRAS1O95057 198 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 OPN1SWP03999 348 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 GPC1P35052 558 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 ALDH3B2P48448 385 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 CDK9P50750 372 aaKnown RBP22.05■■□□□ 1.12
MSX2-201ENST00000239243 ADAMTS16Q8TE57 1224 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 GEMIN6Q8WXD5 167 aaKnown RBP22.05■■□□□ 1.12
MSX2-201ENST00000239243 THAP11Q96EK4 314 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 GPR27Q9NS67 375 aa22.05■■□□□ 1.12
MSX2-201ENST00000239243 DDX18Q9NVP1 670 aaKnown RBP22.05■■□□□ 1.12
MSX2-201ENST00000239243 PDP1Q9P0J1 537 aaPredicted RBP22.05■■□□□ 1.12
MSX2-201ENST00000239243 APOBEC3BQ9UH17 382 aaKnown RBP22.05■■□□□ 1.12
MSX2-201ENST00000239243 THEGLP0DJG4 465 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 UGT2B7P16662 529 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 BLKP51451 505 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 SMAD2Q15796 467 aaKnown RBP22.04■■□□□ 1.12
MSX2-201ENST00000239243 KDM4DQ6B0I6 523 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 HORMAD2Q8N7B1 307 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 PIK3C3Q8NEB9 887 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 GLIPR2Q9H4G4 154 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 SEMA3GQ9NS98 782 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 ACTR10Q9NZ32 417 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 KIF17Q9P2E2 1029 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 CPNE7Q9UBL6 633 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 ENTPD4Q9Y227 616 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 SPTBN5Q9NRC6 3674 aaKnown RBP22.04■■□□□ 1.12
MSX2-201ENST00000239243 A0A1W2PPC4 97 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 GSAPA4D1B5 854 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 TMEM247A6NEH6 219 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 UGT2B11O75310 529 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 PDE9AO76083 593 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 SKIV2LQ15477 1246 aaKnown RBP22.04■■□□□ 1.12
MSX2-201ENST00000239243 RBM48Q5RL73 367 aaKnown RBP22.04■■□□□ 1.12
MSX2-201ENST00000239243 BHLHB9Q6PI77 547 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 TMEM64Q6YI46 380 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 RBM44Q6ZP01 1051 aaKnown RBP22.04■■□□□ 1.12
MSX2-201ENST00000239243 VN1R4Q7Z5H5 301 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 LMAN1LQ9HAT1 526 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 GIMAP4Q9NUV9 329 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 ATG4BQ9Y4P1 393 aa22.04■■□□□ 1.12
MSX2-201ENST00000239243 MDC1Q14676 2089 aaKnown RBP22.03■■□□□ 1.12
MSX2-201ENST00000239243 A0A1W2PR48 441 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 URADA6NGE7 173 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 CERS1P27544 350 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 PIGAP37287 484 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 NCBP2P52298 156 aaKnown RBP eCLIP22.03■■□□□ 1.12
MSX2-201ENST00000239243 CDH15P55291 814 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 RAB8AP61006 207 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 OR10G6Q8NH81 332 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 NDUFAF4Q9P032 175 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 FBXW2Q9UKT8 454 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 OR6C74A6NCV1 312 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 C2orf74A8MZ97 194 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 JRKO75564 520 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 OR6B1O95007 311 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 AIFM1O95831 613 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 CTSEP14091 401 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 POLR2CP19387 275 aaPredicted RBP22.03■■□□□ 1.12
MSX2-201ENST00000239243 MAGP20916 626 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 ANXA11P50995 505 aaKnown RBP22.03■■□□□ 1.12
MSX2-201ENST00000239243 ESRRGP62508 458 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 RELAQ04206 551 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 EIF2B5Q13144 721 aaKnown RBP22.03■■□□□ 1.12
MSX2-201ENST00000239243 TP53BP2Q13625 1128 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 SLC48A1Q6P1K1 146 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 TNFAIP8L2Q6P589 184 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms