RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SLC16A8O95907 504 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SUOXP51687 545 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 CLCN2P51788 898 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 ERVPABLB-1P60509 514 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 NTHL1P78549 312 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 COQ5Q5HYK3 327 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 MEDAGQ5VYS4 303 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SLC27A4Q6P1M0 643 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 SLITRK4Q8IW52 837 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 OR2L3Q8NG85 312 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 OR5M3Q8NGP4 307 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 HCAR2Q8TDS4 363 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
NOD1-201ENST00000222823 L3HYPDHQ96EM0 354 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 MYO7AQ13402 2215 aa11.04□□□□□ -0.64
NOD1-201ENST00000222823 EIF3FO00303 357 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 RNGTTO60942 597 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 CELP19835 753 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PTNP21246 168 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 F8A1P23610 371 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ELK4P28324 431 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CPOXP36551 454 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 MOGQ16653 247 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 FLYWCH1Q4VC44 716 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CES4AQ5XG92 561 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 KCTD11Q693B1 232 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF627Q7L945 461 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 GOLM1Q8NBJ4 401 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CLCC1Q96S66 551 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 OR51I1Q9H343 314 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 IL21RQ9HBE5 538 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CSNK1G1Q9HCP0 422 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PRTFDC1Q9NRG1 225 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZDHHC7Q9NXF8 308 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 AASSQ9UDR5 926 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF451Q9Y4E5 1061 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PCDHB14Q9Y5E9 798 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF670-ZNF695F2Z2N8 137 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PABPC4LP0CB38 370 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 NR2C1P13056 603 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ELOCQ15369 112 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF613Q6PF04 617 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ARMC10Q8N2F6 343 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 TOMM5Q8N4H5 51 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 Q8N9G6 341 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 MINDY2Q8NBR6 621 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 NUP43Q8NFH3 380 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 OR6N1Q8NGY5 312 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 MKLN1Q9UL63 735 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ACTL7AQ9Y615 435 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 C1orf226A1L170 272 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 GRXCR1A8MXD5 290 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 DENRO43583 198 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 GATBO75879 557 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 FHP07954 510 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 C7P10643 843 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PEPDP12955 493 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 RPL34P49207 117 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CLEC14AQ86T13 490 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 JAGN1Q8N5M9 183 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PNLDC1Q8NA58 520 aaKnown RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 OR51G2Q8NGK0 314 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 RBP7Q96R05 134 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 DPH2Q9BQC3 489 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 PRODH2Q9UF12 536 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 EMC8O43402 210 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CDC123O75794 336 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF432O94892 652 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 HSD17B1P14061 328 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 GABRA3P34903 492 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CASRP41180 1078 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 SLC9A3P48764 834 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 FCHO2Q0JRZ9 810 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 WDR45BQ5MNZ6 344 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 PGM2L1Q6PCE3 622 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CCDC80Q76M96 950 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF550Q7Z398 422 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZSWIM9Q86XI8 627 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF101Q8IZC7 436 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 ZNF420Q8TAQ5 688 aaPredicted RBP11.03□□□□□ -0.64
NOD1-201ENST00000222823 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 SLC12A9Q9BXP2 914 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CHIAQ9BZP6 476 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 METTL7AQ9H8H3 244 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 SEC14L4Q9UDX3 406 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
NOD1-201ENST00000222823 CYP8B1Q9UNU6 501 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms