RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 DEPDC1Q5TB30 811 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 DESI1Q6ICB0 168 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ERAP2Q6P179 960 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 CCDC149Q6ZUS6 474 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 WDR36Q8NI36 951 aaKnown RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 SGPP1Q9BX95 441 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ABCG4Q9H172 646 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 CLN6Q9NWW5 311 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ANGPT4Q9Y264 503 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 UGT2A1Q9Y4X1 527 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ANKDD1BA6NHY2 528 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ZAR1LA6NP61 321 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 PLK4O00444 970 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 CTDSP2O14595 271 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 MED26O95402 600 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 BCHEP06276 602 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 CKMT1AP12532 417 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 IRS1P35568 1242 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ALDH9A1P49189 494 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 LIMK1P53667 647 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 PNLIPRP1P54315 467 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF45Q02386 682 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 PRKCDQ05655 676 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ELOAQ14241 798 aaKnown RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 NFE2L1Q14494 772 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ANKRD33Q7Z3H0 272 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF296Q8WUU4 475 aaPredicted RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 RAB8BQ92930 207 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 HHIPL1Q96JK4 782 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 MAPKAP1Q9BPZ7 522 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 NLNQ9BYT8 704 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
C11orf54-215ENST00000617482 C5AR2Q9P296 337 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 KLK4Q9Y5K2 254 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 A3GALT2U3KPV4 340 aa11.25□□□□□ -0.61
C11orf54-215ENST00000617482 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ENTPD6O75354 484 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SOD1P00441 154 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SRPRAP08240 638 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF658BQ4V348 819 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ATAD3BQ5T9A4 648 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 PLAG1Q6DJT9 500 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 RAET1GQ6H3X3 334 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 REEP3Q6NUK4 255 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 VN1R5Q7Z5H4 357 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 HORMAD2Q8N7B1 307 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SLC38A5Q8WUX1 472 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 WDR34Q96EX3 536 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ZSWIM3Q96MP5 696 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 CDCA4Q9BXL8 241 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 RSPO3Q9BXY4 272 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 NUAK2Q9H093 628 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SLAMF7Q9NQ25 335 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 CCDC177Q9NQR7 707 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 C14orf119Q9NWQ9 140 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ERVK13-1Q9NX77 482 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 NFKBIL1Q9UBC1 381 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 CLEC2DQ9UHP7 191 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 PCDHGB6Q9Y5F9 930 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 TSPAN11A1L157 253 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 A8MVJ9 347 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 HAT1O14929 419 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 LILRB5O75023 590 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 MOSPD3O75425 235 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 POP7O75817 140 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 HOXD12P35452 270 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SOX6P35712 828 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 RPL3P39023 403 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SOX3P41225 446 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 PIK3CBP42338 1070 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 MAPK9P45984 424 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 MANFP55145 182 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SEC23BQ15437 767 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SSX1Q16384 188 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF770Q6IQ21 691 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 SPATC1Q76KD6 591 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 WDR53Q7Z5U6 358 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 BCDIN3DQ7Z5W3 292 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 AKAP14Q86UN6 197 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 RBM45Q8IUH3 476 aaKnown RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 ZNF547Q8IVP9 402 aa11.24□□□□□ -0.61
C11orf54-215ENST00000617482 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-215ENST00000617482 VANGL1Q8TAA9 524 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms