RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 E2F1Q01094 437 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 YOD1Q5VVQ6 348 aaPredicted RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 C8orf82Q6P1X6 216 aaPredicted RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 CYB5D1Q6P9G0 228 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 CCDC115Q96NT0 180 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 PANX1Q96RD7 426 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 SLC39A3Q9BRY0 314 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 NDC1Q9BTX1 674 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 CLK4Q9HAZ1 481 aaKnown RBP21.36■■□□□ 1.01
IRF3-228ENST00000601291 SERHLQ9NQF3 203 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 PRDM9Q9NQV7 894 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 TAS2R7Q9NYW3 318 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 KCMF1Q9P0J7 381 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 CLCA2Q9UQC9 943 aa21.36■■□□□ 1.01
IRF3-228ENST00000601291 ADAMTS20P59510 1910 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 ASXL3Q9C0F0 2248 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 PDPK1O15530 556 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 SCN2BO60939 215 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 RFPL3O75679 317 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 TRPC1P48995 793 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 HNRNPFP52597 415 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 ARSFP54793 590 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 ZFP36L1Q07352 338 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 CAPRIN1Q14444 709 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 C18orf63Q68DL7 685 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 DLEU7Q6UYE1 221 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 DNAJC14Q6Y2X3 702 aaPredicted RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 RBM44Q6ZP01 1051 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 CA13Q8N1Q1 262 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 EXOSC8Q96B26 276 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 MVB12AQ96EY5 273 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 CDRT15Q96T59 188 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 GPATCH1Q9BRR8 931 aaKnown RBP21.35■■□□□ 1.01
IRF3-228ENST00000601291 SLAMF8Q9P0V8 285 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 UTS2RQ9UKP6 389 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 PSME2Q9UL46 239 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 PCDHGB4Q9UN71 923 aa21.35■■□□□ 1.01
IRF3-228ENST00000601291 MYO15AQ9UKN7 3530 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 DMDP11532 3685 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 FOXS1O43638 330 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 MED26O95402 600 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 RAB38P57729 211 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 CORO7P57737 925 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 LRIF1Q5T3J3 769 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 STPG1Q5TH74 334 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 OR52E8Q6IFG1 317 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 SLC48A1Q6P1K1 146 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 ADAMTS18Q8TE60 1221 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 CIDECQ96AQ7 238 aaPredicted RBP21.34■■□□□ 1.01
IRF3-228ENST00000601291 GBP5Q96PP8 586 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 OR6C1Q96RD1 312 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 CGREF1Q99674 301 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 GIMAP4Q9NUV9 329 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 ADA2Q9NZK5 511 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 RARRES3Q9UL19 164 aa21.34■■□□□ 1.01
IRF3-228ENST00000601291 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.34■■□□□ 1.01
IRF3-228ENST00000601291 UNC13CQ8NB66 2214 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 GLOD5A6NK44 160 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 H0YIG0 161 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 GDF9O60383 454 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 PRKRAO75569 313 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 CPSF4O95639 269 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 CCDC157Q569K6 752 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 TTLL10Q6ZVT0 673 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 SCUBE1Q8IWY4 988 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 ULK2Q8IYT8 1036 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 CLECL1Q8IZS7 167 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 AGBL5Q8NDL9 886 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 OR5T3Q8NGG3 340 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 OR4A15Q8NGL6 344 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 DNAJB14Q8TBM8 379 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 UTP4Q969X6 686 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 MIEF2Q96C03 454 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 MMABQ96EY8 250 aaPredicted RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 INPP5KQ9BT40 448 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 PAIP1Q9H074 479 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 RPF2Q9H7B2 306 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 SIDT1Q9NXL6 827 aaKnown RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 C5AR2Q9P296 337 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.33■■□□□ 1.01
IRF3-228ENST00000601291 CDC14AQ9UNH5 594 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 SRPK3Q9UPE1 567 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 ENTPD4Q9Y227 616 aa21.33■■□□□ 1.01
IRF3-228ENST00000601291 A0A1W2PRB8 838 aa21.32■■□□□ 1
IRF3-228ENST00000601291 NVLO15381 856 aaKnown RBP21.32■■□□□ 1
IRF3-228ENST00000601291 NTSP30990 170 aa21.32■■□□□ 1
IRF3-228ENST00000601291 SLC7A2P52569 658 aa21.32■■□□□ 1
IRF3-228ENST00000601291 SHC2P98077 582 aa21.32■■□□□ 1
IRF3-228ENST00000601291 MPEG1Q2M385 716 aa21.32■■□□□ 1
IRF3-228ENST00000601291 B3GNT8Q7Z7M8 397 aa21.32■■□□□ 1
IRF3-228ENST00000601291 KIAA2013Q8IYS2 634 aa21.32■■□□□ 1
IRF3-228ENST00000601291 ZBED6CLQ96FA7 236 aaPredicted RBP21.32■■□□□ 1
IRF3-228ENST00000601291 SLC35C2Q9NQQ7 365 aa21.32■■□□□ 1
IRF3-228ENST00000601291 NDOR1Q9UHB4 597 aa21.32■■□□□ 1
IRF3-228ENST00000601291 L3MBTL1Q9Y468 752 aa21.32■■□□□ 1
IRF3-228ENST00000601291 PROB1E7EW31 1015 aa21.31■■□□□ 1
IRF3-228ENST00000601291 PGRMC2O15173 223 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ZNF749O43361 778 aa21.31■■□□□ 1
IRF3-228ENST00000601291 CHST10O43529 356 aa21.31■■□□□ 1
IRF3-228ENST00000601291 ERAL1O75616 437 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms