RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 RNF215Q9Y6U7 377 aa9.66□□□□□ -0.86
APOC1-201ENST00000586638 CACNA1EQ15878 2313 aa9.66□□□□□ -0.86
APOC1-201ENST00000586638 TRABD2BA6NFA1 517 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 RHPN2P1A8MT19 583 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 FAM220BPB1ANY3 271 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 H0YGG7 62 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 PDPK1O15530 556 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 STAMBPO95630 424 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 CER1O95813 267 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 BAG2O95816 211 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 EIF2S1P05198 315 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 C8BP07358 591 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 SLC35G6P0C7Q6 338 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ANPEPP15144 967 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 IL1RNP18510 177 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ATP5A1P25705 553 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 EPHA8P29322 1005 aaPredicted RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 SOAT1P35610 550 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 TRPC1P48995 793 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 HNRNPFP52597 415 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 ARF3P61204 181 aaPredicted RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 STXBP1P61764 594 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 AP2B1P63010 937 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 BTN3A2P78410 334 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 TRAP1Q12931 704 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 ANXA8L1Q5VT79 327 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 LCN8Q6JVE9 175 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 FAM180BQ6P0A1 224 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 AAGABQ6PD74 315 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 OGFOD3Q6PK18 319 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 FAM92BQ6ZTR7 304 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 GPR155Q7Z3F1 870 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 DHFR2Q86XF0 187 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 SLC35F3Q8IY50 421 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ARL10Q8N8L6 244 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 OR10A6Q8NH74 314 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 FAM110BQ8TC76 370 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 PNPT1Q8TCS8 783 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 EXOSC8Q96B26 276 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 LRGUKQ96M69 825 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 GBP5Q96PP8 586 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 KCNC2Q96PR1 638 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ELF4Q99607 663 aaPredicted RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 PRPF18Q99633 342 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 MAP3K3Q99759 626 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 TBCDQ9BTW9 1192 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 THUMPD3Q9BV44 507 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 TRIM15Q9C019 465 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 SEMA6CQ9H3T2 930 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ERVMER34-1Q9H9K5 563 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ATAD3AQ9NVI7 634 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 DKK4Q9UBT3 224 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 BCAP29Q9UHQ4 241 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 FBXW2Q9UKT8 454 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 ACSL6Q9UKU0 697 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 MRPS2Q9Y399 296 aaKnown RBP9.65□□□□□ -0.86
APOC1-201ENST00000586638 PCDHGB2Q9Y5G2 931 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 KLK4Q9Y5K2 254 aa9.65□□□□□ -0.86
APOC1-201ENST00000586638 PRSS51A0A1B0GVH4 220 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 TCRBV3S1A0A5B6 114 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 C1orf226A1L170 272 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ZNF860A6NHJ4 632 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SLC9B1P1A6NJY1 282 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 RNASET2O00584 256 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 FLRT2O43155 660 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 HCRTR1O43613 425 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 KIF1CO43896 1103 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 AIFM1O95831 613 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 C9P02748 559 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 CTSBP07858 339 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 GIMD1P0DJR0 217 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 DDCP20711 480 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 HIST1H1TP22492 207 aaPredicted RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 HTR1EP28566 365 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 OR1D5P58170 312 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 VSX2P58304 361 aaPredicted RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 TRA2BP62995 288 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 TGM3Q08188 693 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SPATS1Q496A3 300 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 NDUFAF5Q5TEU4 345 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 NKAIN2Q5VXU1 208 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 MRM1Q6IN84 353 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 KLHL35Q6PF15 583 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 RNF111Q6ZNA4 994 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 ZNF551Q7Z340 670 aaPredicted RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 PTRH1Q86Y79 214 aaKnown RBP9.64□□□□□ -0.87
APOC1-201ENST00000586638 GATAD2AQ86YP4 633 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SPPL2CQ8IUH8 684 aa9.64□□□□□ -0.87
APOC1-201ENST00000586638 SDR16C5Q8N3Y7 309 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms