RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 FOPNLQ96NB1 174 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 EBNA1BP2Q99848 306 aaKnown RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 TSSK1BQ9BXA7 367 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 EML4Q9HC35 981 aaKnown RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 CLCF1Q9UBD9 225 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 CHCHD2Q9Y6H1 151 aaPredicted RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 A0A0G2JN53 185 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 LRRC14BA6NHZ5 514 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 LRRC10BA6NIK2 292 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PRMT5O14744 637 aaPredicted RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 NRDCO43847 1150 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 SSX4O60224 188 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 TRIM3O75382 744 aaPredicted RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 VENTXO95231 258 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 METTL18O95568 372 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 TGM6O95932 706 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 C1QAP02745 245 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 SLC35G6P0C7Q6 338 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 DANCRP0C864 163 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 RNH1P13489 461 aaKnown RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 PTNP21246 168 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 TBPL1P62380 186 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 SRYQ05066 204 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PRPSAP1Q14558 356 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 ETFDHQ16134 617 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 KLHL38Q2WGJ6 581 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 MEI1Q5TIA1 1274 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 SH2D5Q6ZV89 423 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 BZW1Q7L1Q6 419 aaKnown RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 ADGRE4PQ86SQ3 457 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PLD6Q8N2A8 252 aaKnown RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 DOK4Q8TEW6 326 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PTPMT1Q8WUK0 201 aaPredicted RBP10.04□□□□□ -0.8
GGA3-206ENST00000578773 PLPPR2Q96GM1 343 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 FERMT1Q9BQL6 677 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 TMEM204Q9BSN7 226 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 HEMGNQ9BXL5 484 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 OR8D2Q9GZM6 311 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 UBQLN3Q9H347 655 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 GOLPH3Q9H4A6 298 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 QPCTLQ9NXS2 382 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 HEY2Q9UBP5 337 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 ZNF148Q9UQR1 794 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PCDHA13Q9Y5I0 950 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 PCNX3Q9H6A9 2034 aa10.04□□□□□ -0.8
GGA3-206ENST00000578773 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 HPNP05981 417 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 POU2F1P14859 743 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 DIO3P55073 304 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 MTTPP55157 894 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 SIRPAP78324 504 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 RUNX2Q13950 521 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 TFDP2Q14188 446 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 TSTD2Q5T7W7 516 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 OPN5Q6U736 354 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 SBSNQ6UWP8 590 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 ATG4DQ86TL0 474 aaPredicted RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 YRDCQ86U90 279 aaKnown RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 FAM47BQ8NA70 645 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 FAM13CQ8NE31 585 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 ABTB1Q969K4 478 aaPredicted RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 TRMT61AQ96FX7 289 aaKnown RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 QRFPRQ96P65 431 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 GNRHR2Q96P88 292 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 CSF3RQ99062 836 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 UVRAGQ9P2Y5 699 aa10.03□□□□□ -0.8
GGA3-206ENST00000578773 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
GGA3-206ENST00000578773 HRKO00198 91 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 PSMD12O00232 456 aaPredicted RBP10.02□□□□□ -0.81
GGA3-206ENST00000578773 MSTNO14793 375 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 TCF21O43680 179 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 OR10H2O60403 315 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 ETHE1O95571 254 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 CYP4B1P13584 511 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 GRIA1P42261 906 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 CCZ1BP86790 482 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 CCZ1P86791 482 aaPredicted RBP10.02□□□□□ -0.81
GGA3-206ENST00000578773 RCAN2Q14206 197 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 RPS6KA1Q15418 735 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 FASTKD1Q53R41 847 aaKnown RBP10.02□□□□□ -0.81
GGA3-206ENST00000578773 PIGGQ5H8A4 983 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 BEX5Q5H9J7 111 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 NHSL2Q5HYW2 709 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 PRR31Q5SQ13 230 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 TMEM64Q6YI46 380 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 REXO1L1PQ8IX06 675 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 C9orf40Q8IXQ3 194 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 TC2NQ8N9U0 490 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 OR10H5Q8NGA6 315 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 GIMAP7Q8NHV1 300 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 ZPLD1Q8TCW7 415 aa10.02□□□□□ -0.81
GGA3-206ENST00000578773 ATL1Q8WXF7 558 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms