RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ACSBG2Q5FVE4 666 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 PRAMEF20Q5VT98 475 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 EEF1A1P5Q5VTE0 462 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SLC22A10Q63ZE4 541 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 MRNIPQ6NTE8 343 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SDCCAG8Q86SQ7 713 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 DND1Q8IYX4 353 aaKnown RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 MAPK1IP1LQ8NDC0 245 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 OR8K3Q8NH51 312 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 OR14A16Q8NHC5 309 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 GABPB2Q8TAK5 448 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 SLC22A8Q8TCC7 542 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 NT5CQ8TCD5 201 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 UCN3Q969E3 161 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 FAM136AQ96C01 138 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ZBED6CLQ96FA7 236 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 ZNF597Q96LX8 424 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 FAM118BQ9BPY3 351 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 DOHHQ9BU89 302 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 CALHM2Q9HA72 323 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 LRTM1Q9HBL6 345 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SEMA4BQ9NPR2 832 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 ABHD10Q9NUJ1 306 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 ZNF701Q9NV72 531 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 KLHL28Q9NXS3 571 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 PSD3Q9NYI0 1048 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 MARCH4Q9P2E8 410 aaPredicted RBP5.41□□□□□ -1.54
SMG6-219ENST00000575663 PACSIN3Q9UKS6 424 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 EFR3BQ9Y2G0 817 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 TCAF1Q9Y4C2 921 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 COMMD10Q9Y6G5 202 aa5.41□□□□□ -1.54
SMG6-219ENST00000575663 SCN2AQ99250 2005 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 A0A088AWK7 358 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 PABPN1LA6NDY0 278 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 LRRC3CA6NJW4 275 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 KDM4EB2RXH2 506 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 OR1F1O43749 312 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 LCMT2O60294 686 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 TRAPPC6AO75865 159 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TJP3O95049 919 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 B3GALT4O96024 378 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 CCDC175P0C221 793 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 RFPL3SP0C7P2 107 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 MPC1LP0DKB6 136 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 CYP4B1P13584 511 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 ZNF10P21506 573 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 FMO4P31512 558 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 THBS2P35442 1172 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 IDUAP35475 653 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 SKIV2L2P42285 1042 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 RPL21P46778 160 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 CCR8P51685 355 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 RPS4XP62701 263 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 RNF4P78317 190 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 OCRLQ01968 901 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 GAB1Q13480 694 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TBCELQ5QJ74 424 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 C6orf52Q5T4I8 152 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 BHLHB9Q6PI77 547 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 SYDE1Q6ZW31 735 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 UBE2R2Q712K3 238 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 STRA8Q7Z7C7 330 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 SCUBE1Q8IWY4 988 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 REXO1L1PQ8IX06 675 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 LRRC56Q8IYG6 542 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 CA13Q8N1Q1 262 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 C9orf106Q8NAJ2 232 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 MORN4Q8NDC4 146 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TRPV3Q8NET8 790 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 UTP15Q8TED0 518 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 PAQR8Q8TEZ7 354 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 LPGAT1Q92604 370 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 KRT35Q92764 455 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 FAR2Q96K12 515 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 ZNF778Q96MU6 729 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 RUNDC3BQ96NL0 473 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 BIRC8Q96P09 236 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 FAM111AQ96PZ2 611 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 MYCBPQ99417 103 aaPredicted RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 TIMP4Q99727 224 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TM9SF2Q99805 663 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 HAUS8Q9BT25 410 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 BEX2Q9BXY8 128 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 REG4Q9BYZ8 158 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 PRTFDC1Q9NRG1 225 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 HOMER3Q9NSC5 361 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 RYDENQ9NUL5 291 aaKnown RBP5.4□□□□□ -1.54
SMG6-219ENST00000575663 CNIH4Q9P003 139 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
SMG6-219ENST00000575663 TRBC2A0A5B9 178 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 A8MXE2 369 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 H0Y3Z8 333 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MSTNO14793 375 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 SNPHO15079 494 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 SIAH2O43255 324 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 DYRK3O43781 588 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 COX7A2P14406 83 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 PPP2R1BP30154 601 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms