RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 OR2A25A4D2G3 310 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PRR23AA6NEV1 266 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZNF233A6NK53 670 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FAM90A7PA6NKC0 464 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ANXA2P2A6NMY6 339 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 HSPB2A8KAH6 182 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FAM90A22PA8MWA6 464 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FAM90A12PA8MX19 464 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FAM90A23PA8MXZ1 464 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 A8MZ25 164 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PDXKO00764 312 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 B4GALT5O43286 388 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 EXTL3O43909 919 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FAM189A1O60320 539 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZIC3O60481 467 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CIDEAO60543 219 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TADA2AO75478 443 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KDM4BO94953 1096 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 AKR7A3O95154 331 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CLDN14O95500 239 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CXCL14O95715 111 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KRT6BP04259 564 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 URODP06132 367 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 MMP2P08253 660 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CYC1P08574 325 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 UROSP10746 265 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 RALAP11233 206 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 COX7A2P14406 83 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 NCF1P14598 390 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 PFKFB1P16118 471 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZNF3P17036 446 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 DDX5P17844 614 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 CD72P21854 359 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PRKACBP22694 351 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 HOXA9P31269 272 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 HNRNPH1P31943 449 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 FASLGP48023 281 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KRT6CP48668 564 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SLC11A1P49279 550 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PRRX1P54821 245 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 OLR1P78380 273 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ARL16Q0P5N6 197 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TMEM115Q12893 351 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZNF155Q12901 538 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 ABRQ12979 859 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 IL24Q13007 206 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PLD1Q13393 1074 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KCNC3Q14003 757 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 RBM39Q14498 530 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 NAB2Q15742 525 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 HSPB2Q16082 182 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 UPP1Q16831 310 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KNOP1Q1ED39 458 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SOWAHAQ2M3V2 549 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KCTD21Q4G0X4 260 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZNF766Q5HY98 468 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SFMBT2Q5VUG0 894 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ADAM5Q6NVV9 412 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CDC73Q6P1J9 531 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CORO6Q6QEF8 472 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 C15orf39Q6ZRI6 1047 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ZNF771Q7L3S4 317 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 DGLUCYQ7Z3D6 616 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SMIM29Q86T20 159 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 WDR49Q8IV35 697 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PSTKQ8IV42 348 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 ARHGAP12Q8IWW6 846 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 KLHL7Q8IXQ5 586 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CLYBLQ8N0X4 340 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 GUF1Q8N442 669 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 LRRC52Q8N7C0 313 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 GBP7Q8N8V2 638 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 IL17RCQ8NAC3 791 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 BEST2Q8NFU1 509 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TRIM58Q8NG06 486 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 OR8K5Q8NH50 307 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 LILRB4Q8NHJ6 448 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 ST7LQ8TDW4 575 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SLC26A7Q8TE54 656 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 METTL21AQ8WXB1 218 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 FIG4Q92562 907 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TANKQ92844 425 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 NCLNQ969V3 563 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SLAMF9Q96A28 289 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TMEM186Q96B77 213 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 INTS12Q96CB8 462 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 PAGE5Q96GU1 130 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 CPB2Q96IY4 423 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 C3orf30Q96M34 536 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 DUX3Q96PT4 197 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 NAP1L3Q99457 506 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 HNRNPABQ99729 332 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 SSX3Q99909 188 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 SIKE1Q9BRV8 207 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.36□□□□□ -1.87
CDC27-213ENST00000571643 KIFC3Q9BVG8 833 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 NUP85Q9BW27 656 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms