RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 KCNJ1P48048 391 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 VPS41P49754 854 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 HNRNPFP52597 415 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 DCAF7P61962 342 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 GPS1Q13098 491 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 RUNX2Q13950 521 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 PCBP2Q15366 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 HSP90AA5PQ58FG0 334 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ANKRD22Q5VYY1 191 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 SHEQ5VZ18 495 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 NXPE4Q6UWF7 544 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 CHSY3Q70JA7 882 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 PRIMA1Q86XR5 153 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 KIF18BQ86Y91 864 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 KRTAP1-3Q8IUG1 177 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ULK2Q8IYT8 1036 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM47BQ8NA70 645 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 MORN4Q8NDC4 146 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 OR5L2Q8NGL0 311 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 OR8K3Q8NH51 312 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 OR14A16Q8NHC5 309 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 NUDT8Q8WV74 236 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 MAIP1Q8WWC4 291 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 SREK1Q8WXA9 508 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 MDFIQ99750 246 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 BAG1Q99933 345 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 DESI2Q9BSY9 194 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 AICDAQ9GZX7 198 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF703Q9H7S9 590 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 PLEKHF2Q9H8W4 249 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF629Q9UEG4 869 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 A0A0G2JN53 185 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 ERI3O43414 337 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 B3GALT2O43825 422 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 GUCA1CO95843 209 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 ENO2P09104 434 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 CDKN2DP55273 166 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 IL2P60568 153 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 RNF4P78317 190 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 RCN2Q14257 317 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 TRIP13Q15645 432 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 KCTD19Q17RG1 926 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 CLNKQ7Z7G1 428 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.89□□□□□ -0.676e-7■■■■■ 139.2
GTF3C1-209ENST00000568569 KLHDC8AQ8IYD2 350 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 C2CD4AQ8NCU7 369 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 NAXEQ8NCW5 288 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 TMEM52Q8NDY8 209 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 TTLQ8NG68 377 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 PTPMT1Q8WUK0 201 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 SERPINB12Q96P63 405 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 OR8D2Q9GZM6 311 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 SEMA4BQ9NPR2 832 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 IARS2Q9NSE4 1012 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 BEX4Q9NWD9 120 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 VTI1BQ9UEU0 232 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 BOKQ9UMX3 212 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 KCNE2Q9Y6J6 123 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 STAB1Q9NY15 2570 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 TLN2Q9Y4G6 2542 aa10.89□□□□□ -0.67
GTF3C1-209ENST00000568569 HIVEP2P31629 2446 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 LRIT2A6NDA9 550 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 CLCA1A8K7I4 914 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF354AO60765 605 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 FGGP02679 453 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 CD53P19397 219 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 GSTM2P28161 218 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 PIGAP37287 484 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 KCNJ2P63252 427 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 NKX6-1P78426 367 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 SORDQ00796 357 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 TBL3Q12788 808 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.675e-7■■■□□ 18.1
GTF3C1-209ENST00000568569 MPEG1Q2M385 716 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 ACSF3Q4G176 576 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC22A10Q63ZE4 541 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 THOC6Q86W42 341 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 LACC1Q8IV20 430 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 LIX1Q8N485 282 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 ZNF321PQ8N8H1 164 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 MCUQ8NE86 351 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 TNIP2Q8NFZ5 429 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 GABPB2Q8TAK5 448 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 NEIL3Q8TAT5 605 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC2A12Q8TD20 617 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 MS4A6EQ96DS6 147 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 REPIN1Q9BWE0 567 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 SLC6A15Q9H2J7 730 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 ACKR4Q9NPB9 350 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
GTF3C1-209ENST00000568569 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms