RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ANGPT2O15123 496 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 GALR3O60755 368 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 GUCY1B2O75343 617 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ATP5HO75947 161 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 UNC5CO95185 931 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FAM58BPP0C7Q3 252 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 T-ENOLP0DO92 83 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 COX7A2P14406 83 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 CAPN3P20807 821 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 RPL3P39023 403 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ZFP36L2P47974 494 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 PDX1P52945 283 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 C21orf58P58505 322 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 SKP1P63208 163 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 KLC1Q07866 573 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FOXM1Q08050 763 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 C2orf80Q0P641 193 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 SPRED3Q2MJR0 410 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 MUM1Q2TAK8 710 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FAM174BQ3ZCQ3 159 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 VPS26BQ4G0F5 336 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TIGD2Q4W5G0 525 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 LACTB2Q53H82 288 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 SPANXN4Q5MJ08 99 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 MRM1Q6IN84 353 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FAM71E1Q6IPT2 247 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 NIPAL1Q6NVV3 410 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TLDC1Q6P9B6 456 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 BLOC1S3Q6QNY0 202 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 PRSS41Q7RTY9 318 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 YTHDF3Q7Z739 585 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 PDSS2Q86YH6 399 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 RIMKLAQ8IXN7 391 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 EFCAB3Q8N7B9 438 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 AGBL5Q8NDL9 886 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TSPEARQ8WU66 669 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TTC9Q92623 222 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TESCQ96BS2 214 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TM4SF18Q96CE8 201 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ZNF501Q96CX3 271 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 FAIM2Q9BWQ8 316 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 TRIM4Q9C037 500 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 REEP4Q9H6H4 257 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 ENAMQ9NRM1 1142 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 SIDT1Q9NXL6 827 aaKnown RBP10.49□□□□□ -0.73
SF3B3-205ENST00000564899 SERTAD3Q9UJW9 196 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 NAALAD2Q9Y3Q0 740 aa10.49□□□□□ -0.73
SF3B3-205ENST00000564899 LRRK2Q5S007 2527 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 A0A0A6YYC8 382 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 DYTNA2CJ06 578 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 EFCAB7A8K855 629 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 BBIP1A8MTZ0 92 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 H3BMH7 237 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 I3L1I5 382 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 CFLARO15519 480 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 HNRNPCL1O60812 293 aaKnown RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 RDH16O75452 317 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MED26O95402 600 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 IL6P05231 212 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 FURINP09958 794 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 DDCP20711 480 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 CCKBRP32239 447 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 S100A3P33764 101 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 AVPR1BP47901 424 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 ALDH9A1P49189 494 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MNAT1P51948 309 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 DGKQP52824 942 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 EMP3P54852 163 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 HNRNPH2P55795 449 aaKnown RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 OLR1P78380 273 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MXRA7P84157 204 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MC1RQ01726 317 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 SRSF11Q05519 484 aaKnown RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 STX5Q13190 355 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 FAM53BQ14153 422 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 C16orf72Q14CZ0 275 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 HEPACAMQ14CZ8 416 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 UGT8Q16880 541 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 FAM214AQ32MH5 1076 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 PGS1Q32NB8 556 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MMEL1Q495T6 779 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 REP15Q6BDI9 236 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 ANKRD26P1Q6NSI1 321 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 R3HCC1LQ7Z5L2 792 aaKnown RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 OR7A2PQ8NGA2 310 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 OR9A4Q8NGU2 314 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 NUDT8Q8WV74 236 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 VPS33AQ96AX1 596 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 RCN3Q96D15 328 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 OR6C1Q96RD1 312 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 NPAS2Q99743 824 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MAPKAP1Q9BPZ7 522 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 NDC1Q9BTX1 674 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 MIEF1Q9NQG6 463 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 CUTCQ9NTM9 273 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 AKAP7Q9P0M2 348 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms