RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 EPS8Q12929 822 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 FBXO43Q4G163 708 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 TMEM35AQ53FP2 167 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 TNFAIP8L2Q6P589 184 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-203ENST00000563226 Q6ZSR6 202 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 THAP5Q7Z6K1 395 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 C8orf59Q8N0T1 100 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-203ENST00000563226 SLC22A18ASQ8N1D0 253 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 HORMAD2Q8N7B1 307 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 OR13H1Q8NG92 308 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 SPPL2AQ8TCT8 520 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 NEURL3Q96EH8 262 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 PRDM7Q9NQW5 492 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 EXD2Q9NVH0 621 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 TUBA8Q9NY65 449 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-203ENST00000563226 OR6C2Q9NZP2 312 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 PDP1Q9P0J1 537 aaPredicted RBP18.15■□□□□ 0.5
SMPD3-203ENST00000563226 LOC100130705A0A1B0GUX0 176 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 C10orf142B7Z368 130 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 IGHV4-34P06331 123 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 AKT2P31751 481 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 PTGER1P34995 402 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 OR1E2P47887 323 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 PCBP3P57721 371 aaKnown RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 ZNF630Q2M218 657 aaPredicted RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 CTU2Q2VPK5 515 aaKnown RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 PRRT3Q5FWE3 981 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 ABHD17CQ6PCB6 329 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 CEACAM20Q6UY09 585 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 CCDC80Q76M96 950 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 DGLUCYQ7Z3D6 616 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 SARGQ9BW04 601 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 ING2Q9H160 280 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 TCEAL2Q9H3H9 227 aaPredicted RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 RAD21L1Q9H4I0 556 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 C2orf42Q9NWW7 574 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 THUMPD1Q9NXG2 353 aaKnown RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 USP36Q9P275 1121 aaKnown RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 APOBEC3BQ9UH17 382 aaKnown RBP18.14■□□□□ 0.5
SMPD3-203ENST00000563226 DMTF1Q9Y222 760 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 PADI2Q9Y2J8 665 aa18.14■□□□□ 0.5
SMPD3-203ENST00000563226 AHRP35869 848 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 SNRPNP63162 240 aaKnown RBP18.14■□□□□ 0.49
SMPD3-203ENST00000563226 SLAMF1Q13291 335 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 KDM4DQ6B0I6 523 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 SFTPA2Q8IWL1 248 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 MFSD9Q8NBP5 474 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 PATE1Q8WXA2 126 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 REEP1Q9H902 201 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 NDUFAF4Q9P032 175 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 SCN3AQ9NY46 2000 aa18.14■□□□□ 0.49
SMPD3-203ENST00000563226 TNFRSF10CO14798 259 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CYP4B1P13584 511 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 F3P13726 295 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 HIST1H1TP22492 207 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ATP5A1P25705 553 aaKnown RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CERS1P27544 350 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RAB8AP61006 207 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 TRA2BP62995 288 aaKnown RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 IL1RL1Q01638 556 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 MEP1AQ16819 746 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RPS26P11Q5JNZ5 115 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 LAIR2Q6ISS4 152 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 PAQR7Q86WK9 346 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ACOT4Q8N9L9 421 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 SMYD1Q8NB12 490 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 SGCDQ92629 289 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ZNF764Q96H86 408 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 SRMSQ9H3Y6 488 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 GLIPR2Q9H4G4 154 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 SERHL2Q9H4I8 314 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 NEUROD4Q9HD90 331 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CYP8B1Q9UNU6 501 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ATG4BQ9Y4P1 393 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ASB4Q9Y574 426 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 A0A1W2PR48 441 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 MBTPS2O43462 519 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 KDM1AO60341 852 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 FESP07332 822 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 NDUFS1P28331 727 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RRM2P31350 389 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 GSTM5P46439 218 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RAD23AP54725 363 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 TPD52P55327 224 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CD47Q08722 323 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CRB2Q5IJ48 1285 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 BORAQ6PGQ7 559 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 C6orf120Q7Z4R8 191 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 NATD1Q8N6N6 113 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 CHDHQ8NE62 594 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 PIK3C3Q8NEB9 887 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 OR2L5Q8NG80 312 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RAB8BQ92930 207 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ZBED6CLQ96FA7 236 aaPredicted RBP18.13■□□□□ 0.49
SMPD3-203ENST00000563226 RIBC2Q9H4K1 309 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 TESMINQ9Y4I5 508 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 ORC6Q9Y5N6 252 aa18.13■□□□□ 0.49
SMPD3-203ENST00000563226 A0A1W2PS29 197 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms