RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ERGIC2Q96RQ1 377 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 SSX3Q99909 188 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 PAPOLGQ9BWT3 736 aaKnown RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 HOXD1Q9GZZ0 328 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 TRPV6Q9H1D0 765 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 SPHK2Q9NRA0 654 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 PLCXD1Q9NUJ7 323 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 DDX28Q9NUL7 540 aaKnown RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 NINJ2Q9NZG7 142 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 SPASTQ9UBP0 616 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 COPS7AQ9UBW8 275 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 KCNN3Q9UGI6 736 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 FAM153AQ9UHL3 310 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 PIN4Q9Y237 131 aaKnown RBP4.61□□□□□ -1.67
VRK1-205ENST00000555402 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 CSNK1G3Q9Y6M4 447 aa4.61□□□□□ -1.67
VRK1-205ENST00000555402 CFAP73A6NFT4 308 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 C19orf81C9J6K1 198 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 LMO7DNF2Z398 122 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 TPBGLP0DKB5 382 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 ETS1P14921 441 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 OR1D2P34982 312 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 RABIFP47224 123 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 SLC6A12P48065 614 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 CLK1P49759 484 aaKnown RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 CRIP2P52943 208 aaPredicted RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 CCZ1BP86790 482 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 CCZ1P86791 482 aaPredicted RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 DHODHQ02127 395 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 MTF1Q14872 753 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 TAF1BQ53T94 588 aaPredicted RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 ARHGAP17Q68EM7 881 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 WDR88Q6ZMY6 472 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 ZER1Q7Z7L7 766 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 DND1Q8IYX4 353 aaKnown RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 OR4L1Q8NH43 312 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 GLYATL1Q969I3 302 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 FAM218AQ96MZ4 157 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 DUX3Q96PT4 197 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 S1PR3Q99500 378 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 AGPAT1Q99943 283 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 SYT15Q9BQS2 421 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 FUNDC2Q9BWH2 189 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 GANQ9H2C0 597 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 DPEP3Q9H4B8 488 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 MTHFD2LQ9H903 347 aaPredicted RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 B3GAT2Q9NPZ5 323 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 ACOXLQ9NUZ1 547 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 KLHL8Q9P2G9 620 aaPredicted RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 NARFQ9UHQ1 456 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 MRTO4Q9UKD2 239 aaKnown RBP4.6□□□□□ -1.67
VRK1-205ENST00000555402 NUDCQ9Y266 331 aa4.6□□□□□ -1.67
VRK1-205ENST00000555402 P2RX6O15547 441 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 PTMAP06454 111 aaKnown RBP4.59□□□□□ -1.67
VRK1-205ENST00000555402 GPR183P32249 361 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 CCR4P51679 360 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 BACE1P56817 501 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 EVCP57679 992 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 GAMTQ14353 236 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 FAM189A2Q15884 450 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 TTC31Q49AM3 519 aaPredicted RBP4.59□□□□□ -1.67
VRK1-205ENST00000555402 UMODL1Q5DID0 1318 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 CAPN13Q6MZZ7 669 aaPredicted RBP4.59□□□□□ -1.67
VRK1-205ENST00000555402 NEK5Q6P3R8 708 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 ARHGAP11AQ6P4F7 1023 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 C1orf186Q6ZWK4 172 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 KDM8Q8N371 416 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 MRPL43Q8N983 215 aaKnown RBP4.59□□□□□ -1.67
VRK1-205ENST00000555402 ZNF248Q8NDW4 579 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 OR5M9Q8NGP3 310 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 ATP8B4Q8TF62 1192 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 TMEM186Q96B77 213 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 ZNF577Q9BSK1 485 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 NUSAP1Q9BXS6 441 aaKnown RBP4.59□□□□□ -1.67
VRK1-205ENST00000555402 FGF22Q9HCT0 170 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 MED17Q9NVC6 651 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 KLK11Q9UBX7 282 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 BAIAP2L1Q9UHR4 511 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 DNPEPQ9ULA0 475 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 ZHX2Q9Y6X8 837 aa4.59□□□□□ -1.67
VRK1-205ENST00000555402 IQCMA0A1B0GVH7 501 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CCSO14618 274 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 FGF19O95750 216 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 PGK2P07205 417 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CT45A8P0DMV1 189 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CT45A9P0DMV2 189 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 GPX3P22352 226 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 PRKACGP22612 351 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 GMFBP60983 142 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 SSTP61278 116 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 ZFP69Q49AA0 526 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 MPPE1Q53F39 396 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CT45A2Q5DJT8 189 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CMPK2Q5EBM0 449 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 RTL6Q6ICC9 239 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 ISLR2Q6UXK2 745 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 CACUL1Q86Y37 369 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 ELMOD2Q8IZ81 293 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 OR9Q2Q8NGE9 314 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms