RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 ELAVL1Q15717 326 aaKnown RBP13.11□□□□□ -0.31
SF3B2-215ENST00000534307 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
SF3B2-215ENST00000534307 LIPJQ5W064 366 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 METTL2BQ6P1Q9 378 aaKnown RBP13.11□□□□□ -0.31
SF3B2-215ENST00000534307 KLC3Q6P597 504 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 RNF175Q8N4F7 328 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 HUS1BQ8NHY5 278 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 MAPKAP1Q9BPZ7 522 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 VPS11Q9H270 941 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 COPS7BQ9H9Q2 264 aaPredicted RBP13.11□□□□□ -0.31
SF3B2-215ENST00000534307 ADAP2Q9NPF8 381 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 KLHL1Q9NR64 748 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 PNO1Q9NRX1 252 aaKnown RBP13.11□□□□□ -0.31
SF3B2-215ENST00000534307 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 ADGRE2Q9UHX3 823 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 ZNF180Q9UJW8 692 aa13.11□□□□□ -0.31
SF3B2-215ENST00000534307 SYNDIG1LA6NDD5 238 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 TMEM200CA6NKL6 621 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 H0YIV9 168 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 NME2P1O60361 137 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 UGDHO60701 494 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 SIX3O95343 332 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 SP1P08047 785 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 INHBAP08476 426 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 PCNAP12004 261 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 CD46P15529 392 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 NME2P22392 152 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 GRNP28799 593 aaKnown RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 SERPINB9P50453 376 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 CLCN2P51788 898 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 OC90Q02509 493 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 RCN2Q14257 317 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 GFRALQ6UXV0 394 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 CHSY3Q70JA7 882 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 SIAH3Q8IW03 269 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 L3MBTL4Q8NA19 623 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 TMEM178AQ8NBL3 297 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 PTPMT1Q8WUK0 201 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 NCLNQ969V3 563 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 RELTQ969Z4 430 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 ZNF717Q9BY31 904 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 DEFB126Q9BYW3 111 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 OR51B5Q9H339 312 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 VTI1BQ9UEU0 232 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 PCDHGA11Q9Y5H2 935 aa13.1□□□□□ -0.31
SF3B2-215ENST00000534307 TNPO3Q9Y5L0 923 aaKnown RBP13.1□□□□□ -0.31
SF3B2-215ENST00000534307 TRBV11-1A0A0K0K1C0 115 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SAP18O00422 153 aaKnown RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 PLPP1O14494 284 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 OR7A17O14581 309 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SH3BGRLO75368 114 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SLC25A12O75746 678 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 UNC5CO95185 931 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 PRF1P14222 555 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 CNTFP26441 200 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 EEF1DP29692 281 aaKnown RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SSR2P43308 183 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 CYB561P49447 251 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 HLCSP50747 726 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 ARFIP1P53367 373 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 IGLV3-21P80748 117 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 GTF2H2Q13888 395 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 GTF2H2CQ6P1K8 395 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 WDR20Q8TBZ3 569 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 THAP3Q8WTV1 239 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 ANKRD9Q96BM1 317 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 IPPKQ9H8X2 491 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 CPSF2Q9P2I0 782 aaKnown RBP13.09□□□□□ -0.31
SF3B2-215ENST00000534307 XPR1Q9UBH6 696 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 SEC14L3Q9UDX4 400 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 PKDREJQ9NTG1 2253 aa13.09□□□□□ -0.31
SF3B2-215ENST00000534307 NAV3Q8IVL0 2385 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 A0A087WUV0 522 aaPredicted RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 A0A1B0GUH1 482 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 FCHO1O14526 889 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 LDB3O75112 727 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 ETHE1O95571 254 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 ABHD2P08910 425 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 RBP1P09455 135 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 COL6A2P12110 1019 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 GCAP28676 217 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 PIK3CGP48736 1102 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms