RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 BTNL10A8MVZ5 291 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 AKR1B15C9JRZ8 316 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 CLDN4O14493 209 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 CBFA2T2O43439 604 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 CTSSP25774 331 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 MGAT1P26572 445 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 OPRM1P35372 400 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 HNF4AP41235 474 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 HNRNPFP52597 415 aaKnown RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 RNF4P78317 190 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 CRYZQ08257 329 aaKnown RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 TBX2Q13207 712 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 CTBP1Q13363 440 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 BMPR2Q13873 1038 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 RUNX2Q13950 521 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 SIX1Q15475 284 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 MPEG1Q2M385 716 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 ZNF791Q3KP31 576 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 PIGGQ5H8A4 983 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 NEPROQ6NW34 567 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 ZNF595Q8IYB9 648 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 CCDC170Q8IYT3 715 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 TBC1D19Q8N5T2 526 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 ZNF321PQ8N8H1 164 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 MORN4Q8NDC4 146 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 TRPV3Q8NET8 790 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 OR56A3Q8NH54 315 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 MBD3L2Q8NHZ7 208 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 PPP1R14CQ8TAE6 165 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 PAQR8Q8TEZ7 354 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 PTPMT1Q8WUK0 201 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 DAZLQ92904 295 aaKnown RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 NTNG2Q96CW9 530 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 HSPBAP1Q96EW2 488 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 SECISBP2Q96T21 854 aaKnown RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 GPR21Q99679 349 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 TIMP4Q99727 224 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 NPLQ9BXD5 320 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 FRMD8P1Q9BZ68 369 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 PARVBQ9HBI1 364 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 SYBUQ9NX95 663 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 BOKQ9UMX3 212 aaPredicted RBP7.17□□□□□ -1.26
NXF1-215ENST00000533440 ZNF148Q9UQR1 794 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 CLCA3PQ9Y6N3 262 aa7.17□□□□□ -1.26
NXF1-215ENST00000533440 SYCE3A1L190 88 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 MIF4GDA9UHW6 222 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 EEF1E1-BLOC1S5C9J1V9 151 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 EEF1E1O43324 174 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 CNOT4O95628 575 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 F12P00748 615 aaPredicted RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 C8GP07360 202 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SERPINA6P08185 405 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 F7P08709 466 aaPredicted RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 ZSCAN5DPP0CG00 497 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 FPR1P21462 350 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 RPL22P35268 128 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 TRPC1P48995 793 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 AGFG1P52594 562 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 RAB38P57729 211 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 CCZ1BP86790 482 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 CCZ1P86791 482 aaPredicted RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 REEP5Q00765 189 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 TBL3Q12788 808 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 SLC13A2Q13183 592 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 DUSP8Q13202 625 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SP140Q13342 867 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SF3B4Q15427 424 aaKnown RBP eCLIP7.16□□□□□ -1.264e-7■■□□□ 13.8
NXF1-215ENST00000533440 SPA17Q15506 151 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 ACKR1Q16570 336 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 PHKG1Q16816 387 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 ARMC3Q5W041 872 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SLC22A10Q63ZE4 541 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 DUPD1Q68J44 220 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 LRRC8EQ6NSJ5 796 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 HMBOX1Q6NT76 420 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 PODNL1Q6PEZ8 512 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 LYPD8Q6UX82 237 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 DENND6AQ8IWF6 608 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 PM20D2Q8IYS1 436 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 RASGEF1CQ8N431 466 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 LIX1Q8N485 282 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 UBL4BQ8N7F7 174 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 TC2NQ8N9U0 490 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 OR5L2Q8NGL0 311 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 OR14A16Q8NHC5 309 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 EEF1AKMT1Q8WVE0 214 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SLC5A11Q8WWX8 675 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 TMEM158Q8WZ71 300 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 NEIL2Q969S2 332 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 PYCR2Q96C36 320 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 PERPQ96FX8 193 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 RBM24Q9BX46 236 aaKnown RBP7.16□□□□□ -1.26
NXF1-215ENST00000533440 GSX2Q9BZM3 304 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 CCDC68Q9H2F9 335 aa7.16□□□□□ -1.26
NXF1-215ENST00000533440 FBXO6Q9NRD1 293 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms