RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CCDC197Q8NCU1 140 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 SSC4DQ8WTU2 575 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 PRCCQ92733 491 aaPredicted RBP4.18□□□□□ -1.74
SKP1-208ENST00000521216 WBP1Q96G27 269 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 ANKRD27Q96NW4 1050 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 ATF6BQ99941 703 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
SKP1-208ENST00000521216 JPT2Q9H910 190 aa4.18□□□□□ -1.74
SKP1-208ENST00000521216 A0A1W2PRV1 198 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 GTPBP10A4D1E9 387 aaKnown RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 SERINC4A6NH21 518 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 SRRM4A7MD48 611 aaKnown RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 SHISA9B4DS77 424 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 CACNB4O00305 520 aaPredicted RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 CHRNGP07510 517 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 SMSP52788 366 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 SLC8A3P57103 927 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 FUT11Q495W5 492 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 KCTD11Q693B1 232 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 NEPROQ6NW34 567 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 TIPARPQ7Z3E1 657 aaKnown RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 CARNMT1Q8N4J0 409 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 BANPQ8N9N5 519 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 TRPV3Q8NET8 790 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 PCNPQ8WW12 178 aaKnown RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 TAAR6Q96RI8 345 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 RAB11FIP5Q9BXF6 653 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 OSBPL8Q9BZF1 889 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 TRIM6Q9C030 488 aaPredicted RBP4.17□□□□□ -1.74
SKP1-208ENST00000521216 LRRCC1Q9C099 1032 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 MOB1AQ9H8S9 216 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 SP140LQ9H930 580 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 DEPPQ9NTK1 212 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 FBXW2Q9UKT8 454 aa4.17□□□□□ -1.74
SKP1-208ENST00000521216 LOC390937A0A1W2PQ73 354 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 OR5H15A6NDH6 313 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 IGLON5A6NGN9 336 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 ACOD1A6NK06 481 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 SHISA7A6NL88 538 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 ERI2A8K979 691 aaKnown RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 NEDD8-MDP1E9PL57 170 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 FBP2O00757 339 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 OGTO15294 1046 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 CSO75390 466 aaKnown RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 NUDT17P0C025 328 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 B4GALT1P15291 398 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 GATA1P15976 413 aaPredicted RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 KCNK10P57789 538 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 ITPK1Q13572 414 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 CAPN13Q6MZZ7 669 aaPredicted RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 CYP4V2Q6ZWL3 525 aaPredicted RBP4.16□□□□□ -1.74
SKP1-208ENST00000521216 SLC25A42Q86VD7 318 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 OR6F1Q8NGZ6 308 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 C8orf46Q8TAG6 207 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 TAF15Q92804 592 aaKnown RBP eCLIP4.16□□□□□ -1.74
SKP1-208ENST00000521216 PTP4A1Q93096 173 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 PCED1BQ96HM7 432 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 NMUR1Q9HB89 426 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 EXOC7Q9UPT5 735 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 ERVK-19Q9WJR5 959 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 NIP7Q9Y221 180 aaKnown RBP eCLIP4.16□□□□□ -1.74
SKP1-208ENST00000521216 STYXL1Q9Y6J8 313 aa4.16□□□□□ -1.74
SKP1-208ENST00000521216 ATP6AP2A0A1C7CYW4 349 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 TMEM129A0AVI4 362 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 PSMD3O43242 534 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 AKAP3O75969 853 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 EPOP01588 193 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 ANPEPP15144 967 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 OR1D2P34982 312 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 FHITP49789 147 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 C17orf67Q0P5P2 114 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 GIT2Q14161 759 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 SIX1Q15475 284 aaPredicted RBP4.15□□□□□ -1.75
SKP1-208ENST00000521216 SLC39A12Q504Y0 691 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 ODF2Q5BJF6 829 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 MUC21Q5SSG8 566 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 SLC47A2Q86VL8 602 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 C17orf47Q8NEP4 570 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 LPCAT1Q8NF37 534 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 ST7LQ8TDW4 575 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 HAS2Q92819 552 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 NABP1Q96AH0 204 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 CFAP36Q96G28 342 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 EPSTI1Q96J88 318 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 CXorf58Q96LI9 332 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 GUCD1Q96NT3 240 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 DDX50Q9BQ39 737 aaKnown RBP4.15□□□□□ -1.75
SKP1-208ENST00000521216 PYGO2Q9BRQ0 406 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 CCDC28BQ9BUN5 200 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 PUS3Q9BZE2 481 aaKnown RBP4.15□□□□□ -1.75
SKP1-208ENST00000521216 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 ADNPQ9H2P0 1102 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 GNB4Q9HAV0 340 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 MGAT4AQ9UM21 535 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 KCNK6Q9Y257 313 aa4.15□□□□□ -1.75
SKP1-208ENST00000521216 OR6A2O95222 327 aa4.14□□□□□ -1.75
SKP1-208ENST00000521216 GATA2P23769 480 aaPredicted RBP4.14□□□□□ -1.75
SKP1-208ENST00000521216 PPP2R1AP30153 589 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms